LINC02213

Summary

LINC02213 (long intergenic non-protein coding RNA 2213, HGNC:53080) is a long non-coding RNA gene on chromosome 5p15.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53080
Approved symbol	LINC02213
Name	long intergenic non-protein coding RNA 2213
Location	5p15.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249160
Ensembl biotype	lncRNA
Entrez	389273
RNAcentral	URS0000A77841 — lncRNA, 971 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000504650, ENST00000506021, ENST00000785364

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000504650 — 3 exons

Exon	Start	End
ENSE00002057479	10521756	10522084
ENSE00002086562	10505443	10505524
ENSE00003757795	10506469	10506575

Expression profiles

Bgee: expression breadth broad, 66 present calls, max score 66.38.

Top tissues by expression

66 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	66.38	gold quality
right uterine tube	UBERON:0001302	65.81	gold quality
blood	UBERON:0000178	60.49	gold quality
monocyte	CL:0000576	56.20	gold quality
corpus callosum	UBERON:0002336	56.17	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.12	gold quality
bone marrow	UBERON:0002371	51.64	silver quality
ascending aorta	UBERON:0001496	51.10	gold quality
heart left ventricle	UBERON:0002084	50.91	gold quality
prefrontal cortex	UBERON:0000451	50.61	gold quality
kidney	UBERON:0002113	49.92	gold quality
multicellular organism	UBERON:0000468	49.45	gold quality
fallopian tube	UBERON:0003889	48.88	gold quality
endometrium	UBERON:0001295	48.61	silver quality
right adrenal gland cortex	UBERON:0035827	47.38	gold quality
superior frontal gyrus	UBERON:0002661	47.06	silver quality
body of pancreas	UBERON:0001150	46.99	silver quality
tibial nerve	UBERON:0001323	46.49	gold quality
minor salivary gland	UBERON:0001830	46.35	gold quality
frontal cortex	UBERON:0001870	45.69	gold quality
cerebellar cortex	UBERON:0002129	44.19	silver quality
caudate nucleus	UBERON:0001873	44.09	gold quality
gastrocnemius	UBERON:0001388	43.77	silver quality
muscle layer of sigmoid colon	UBERON:0035805	43.77	gold quality
primary visual cortex	UBERON:0002436	43.74	silver quality
lower esophagus muscularis layer	UBERON:0035833	43.33	gold quality
Brodmann (1909) area 9	UBERON:0013540	43.27	silver quality
spleen	UBERON:0002106	42.96	silver quality
brain	UBERON:0000955	42.88	gold quality
Ammon’s horn	UBERON:0001954	42.88	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.