LINC02243

Summary

LINC02243 (long intergenic non-protein coding RNA 2243, HGNC:53129) is a long non-coding RNA gene on chromosome Xq26.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53129
Approved symbol	LINC02243
Name	long intergenic non-protein coding RNA 2243
Location	Xq26.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	ENST00000441841
Ensembl gene	ENSG00000236091
Ensembl biotype	lncRNA
Entrez	340581
RNAcentral	URS0000A76CE7 — lncRNA, 982 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000441841, ENST00000750648, ENST00000750649, ENST00000750650

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441841 — 3 exons

Exon	Start	End
ENSE00001729770	134950200	134950535
ENSE00004095171	134949530	134949655
ENSE00004095177	134952865	134953386

Expression profiles

Bgee: expression breadth broad, 53 present calls, max score 57.67.

Top tissues by expression

176 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
stromal cell of endometrium	CL:0002255	57.67	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.07	gold quality
buccal mucosa cell	CL:0002336	53.26	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.18	gold quality
left adrenal gland cortex	UBERON:0035825	51.51	gold quality
adrenal tissue	UBERON:0018303	51.03	gold quality
adrenal cortex	UBERON:0001235	49.55	gold quality
left adrenal gland	UBERON:0001234	49.54	gold quality
muscle of leg	UBERON:0001383	48.72	gold quality
adrenal gland	UBERON:0002369	48.42	gold quality
right adrenal gland cortex	UBERON:0035827	47.47	gold quality
prefrontal cortex	UBERON:0000451	47.05	silver quality
gastrocnemius	UBERON:0001388	46.22	silver quality
right adrenal gland	UBERON:0001233	45.78	gold quality
esophagus	UBERON:0001043	45.63	gold quality
esophagus mucosa	UBERON:0002469	45.63	gold quality
islet of Langerhans	UBERON:0000006	45.54	silver quality
lower esophagus mucosa	UBERON:0035834	45.13	silver quality
minor salivary gland	UBERON:0001830	43.37	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
pancreas	UBERON:0001264	43.21	silver quality
Brodmann (1909) area 9	UBERON:0013540	43.09	silver quality
right atrium auricular region	UBERON:0006631	42.68	silver quality
tibial artery	UBERON:0007610	42.64	silver quality
heart	UBERON:0000948	42.63	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
cardiac atrium	UBERON:0002081	42.15	silver quality
blood	UBERON:0000178	42.07	gold quality
apex of heart	UBERON:0002098	42.04	silver quality
left ovary	UBERON:0002119	41.83	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.