LINC02244

Summary

LINC02244 (long intergenic non-protein coding RNA 2244, HGNC:53929) is a long non-coding RNA gene on chromosome 15q26.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53929
Approved symbol	LINC02244
Name	long intergenic non-protein coding RNA 2244
Location	15q26.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-20G13.3
Ensembl gene	ENSG00000259590
Ensembl biotype	lncRNA
Entrez	105371018
RNAcentral	URS00026A1E80 — lncRNA, 1253 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000559569, ENST00000561362, ENST00000717137, ENST00000717138, ENST00000717139, ENST00000717140, ENST00000729753, ENST00000729754, ENST00000729755, ENST00000729756, ENST00000729757

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000559569 — 4 exons

Exon	Start	End
ENSE00002552345	99396486	99396744
ENSE00002559692	99401250	99401352
ENSE00004031736	99394647	99395393
ENSE00004031737	99402272	99402421

Expression profiles

Bgee: expression breadth ubiquitous, 117 present calls, max score 70.72.

Top tissues by expression

117 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow	UBERON:0002371	70.72	gold quality
duodenum	UBERON:0002114	67.10	gold quality
skeletal muscle tissue	UBERON:0001134	66.42	gold quality
primary visual cortex	UBERON:0002436	65.58	gold quality
lymph node	UBERON:0000029	65.40	gold quality
endometrium	UBERON:0001295	64.99	gold quality
gall bladder	UBERON:0002110	63.08	gold quality
prefrontal cortex	UBERON:0000451	63.04	gold quality
monocyte	CL:0000576	62.57	gold quality
superior frontal gyrus	UBERON:0002661	62.47	gold quality
anterior cingulate cortex	UBERON:0009835	62.29	gold quality
Brodmann (1909) area 9	UBERON:0013540	62.07	gold quality
cortex of kidney	UBERON:0001225	61.52	gold quality
islet of Langerhans	UBERON:0000006	61.08	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	61.07	gold quality
frontal cortex	UBERON:0001870	61.06	gold quality
leukocyte	CL:0000738	61.03	gold quality
mucosa of stomach	UBERON:0001199	60.72	gold quality
cerebral cortex	UBERON:0000956	60.58	gold quality
vermiform appendix	UBERON:0001154	60.38	gold quality
right frontal lobe	UBERON:0002810	60.30	gold quality
placenta	UBERON:0001987	60.29	gold quality
muscle of leg	UBERON:0001383	60.12	gold quality
subcutaneous adipose tissue	UBERON:0002190	59.95	gold quality
right coronary artery	UBERON:0001625	59.72	gold quality
blood	UBERON:0000178	59.65	gold quality
gastrocnemius	UBERON:0001388	59.61	gold quality
calcaneal tendon	UBERON:0003701	59.48	gold quality
urinary bladder	UBERON:0001255	59.30	gold quality
adipose tissue	UBERON:0001013	59.10	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.