LINC02265

Summary

LINC02265 (long intergenic non-protein coding RNA 2265, HGNC:53179) is a long non-coding RNA gene on chromosome 4p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53179
Approved symbol	LINC02265
Name	long intergenic non-protein coding RNA 2265
Location	4p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249241
Ensembl biotype	lncRNA
Entrez	101060498
RNAcentral	URS0000D78089 — lncRNA, 958 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000510551, ENST00000840927, ENST00000840928, ENST00000840929, ENST00000840930, ENST00000840931, ENST00000840932, ENST00000840933, ENST00000840934

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000510551 — 3 exons

Exon	Start	End
ENSE00002036809	40326710	40326910
ENSE00003983222	40330160	40330422
ENSE00004264763	40316466	40316980

Expression profiles

Bgee: expression breadth broad, 84 present calls, max score 85.90.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.3198 / max 23.0736, expressed in 101 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
203150	0.3198	101

Top tissues by expression

84 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.90	gold quality
right uterine tube	UBERON:0001302	81.12	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	76.60	gold quality
fallopian tube	UBERON:0003889	68.66	gold quality
muscle tissue	UBERON:0002385	65.97	gold quality
cortical plate	UBERON:0005343	59.68	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.84	silver quality
ganglionic eminence	UBERON:0004023	58.67	gold quality
liver	UBERON:0002107	57.12	silver quality
bone marrow	UBERON:0002371	55.96	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	55.46	gold quality
monocyte	CL:0000576	55.38	gold quality
myometrium	UBERON:0001296	54.31	gold quality
islet of Langerhans	UBERON:0000006	54.20	gold quality
prefrontal cortex	UBERON:0000451	53.76	gold quality
nucleus accumbens	UBERON:0001882	53.37	gold quality
lymph node	UBERON:0000029	53.12	gold quality
hypothalamus	UBERON:0001898	52.41	gold quality
endocervix	UBERON:0000458	51.98	gold quality
amygdala	UBERON:0001876	51.35	gold quality
right hemisphere of cerebellum	UBERON:0014890	50.84	gold quality
blood	UBERON:0000178	50.29	gold quality
lung	UBERON:0002048	50.16	gold quality
tonsil	UBERON:0002372	49.74	gold quality
right lung	UBERON:0002167	49.55	gold quality
frontal cortex	UBERON:0001870	49.36	gold quality
granulocyte	CL:0000094	49.23	silver quality
Ammon’s horn	UBERON:0001954	49.06	gold quality
brain	UBERON:0000955	48.99	gold quality
substantia nigra	UBERON:0002038	48.73	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.22

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.