LINC02271

Summary

LINC02271 (long intergenic non-protein coding RNA 2271, HGNC:53186) is a long non-coding RNA gene on chromosome 4q13.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53186
Approved symbol	LINC02271
Name	long intergenic non-protein coding RNA 2271
Location	4q13.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000240152
Ensembl biotype	lncRNA
Entrez	105377249
RNAcentral	URS0000BC4548 — lncRNA, 518 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000398777, ENST00000506379

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000398777 — 2 exons

Exon	Start	End
ENSE00002063414	61153536	61153962
ENSE00002083397	61143657	61143775

Expression profiles

Bgee: expression breadth ubiquitous, 113 present calls, max score 82.68.

Top tissues by expression

113 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.68	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.44	gold quality
ventricular zone	UBERON:0003053	66.31	gold quality
skeletal muscle tissue	UBERON:0001134	64.88	gold quality
cortical plate	UBERON:0005343	64.17	gold quality
ganglionic eminence	UBERON:0004023	62.76	gold quality
bone marrow	UBERON:0002371	57.47	gold quality
monocyte	CL:0000576	56.73	gold quality
urinary bladder	UBERON:0001255	56.41	gold quality
cerebellar cortex	UBERON:0002129	55.47	gold quality
cerebellum	UBERON:0002037	55.43	gold quality
cerebellar hemisphere	UBERON:0002245	55.37	gold quality
apex of heart	UBERON:0002098	55.14	gold quality
liver	UBERON:0002107	54.63	gold quality
duodenum	UBERON:0002114	54.62	gold quality
right hemisphere of cerebellum	UBERON:0014890	54.44	gold quality
left uterine tube	UBERON:0001303	54.27	gold quality
lymph node	UBERON:0000029	53.94	gold quality
body of pancreas	UBERON:0001150	53.61	gold quality
prefrontal cortex	UBERON:0000451	52.82	gold quality
blood	UBERON:0000178	52.59	gold quality
mucosa of stomach	UBERON:0001199	52.25	gold quality
muscle of leg	UBERON:0001383	52.08	gold quality
islet of Langerhans	UBERON:0000006	52.07	gold quality
right uterine tube	UBERON:0001302	51.97	gold quality
gastrocnemius	UBERON:0001388	51.69	gold quality
testis	UBERON:0000473	51.10	gold quality
vermiform appendix	UBERON:0001154	50.78	gold quality
right adrenal gland	UBERON:0001233	50.71	gold quality
right lobe of liver	UBERON:0001114	50.70	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.