LINC02292

Summary

LINC02292 (long intergenic non-protein coding RNA 2292, HGNC:53208) is a long non-coding RNA gene on chromosome 14q32.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53208
Approved symbol	LINC02292
Name	long intergenic non-protein coding RNA 2292
Location	14q32.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258630
Ensembl biotype	lncRNA
Entrez	101929080
RNAcentral	URS0000020B26 — lncRNA, 1701 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000554522, ENST00000663377, ENST00000663706, ENST00000664645, ENST00000668821, ENST00000669056, ENST00000670233, ENST00000671353, ENST00000673401, ENST00000810655, ENST00000810656

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000554522 — 3 exons

Exon	Start	End
ENSE00002453068	95329584	95329668
ENSE00002482888	95334029	95335504
ENSE00002510699	95332645	95332784

Expression profiles

Bgee: expression breadth broad, 81 present calls, max score 72.42.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0161 / max 11.7282, expressed in 4 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
141287	0.0161	4

Top tissues by expression

81 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right testis	UBERON:0004534	72.42	gold quality
left testis	UBERON:0004533	72.23	gold quality
testis	UBERON:0000473	71.65	gold quality
muscle tissue	UBERON:0002385	63.03	silver quality
mucosa of transverse colon	UBERON:0004991	60.59	gold quality
lung	UBERON:0002048	55.07	silver quality
liver	UBERON:0002107	53.96	gold quality
urinary bladder	UBERON:0001255	53.95	gold quality
right lobe of liver	UBERON:0001114	53.17	gold quality
sural nerve	UBERON:0015488	53.03	silver quality
multicellular organism	UBERON:0000468	52.80	gold quality
transverse colon	UBERON:0001157	52.29	gold quality
colon	UBERON:0001155	51.82	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.55	gold quality
monocyte	CL:0000576	51.39	gold quality
muscle layer of sigmoid colon	UBERON:0035805	51.39	gold quality
rectum	UBERON:0001052	51.36	gold quality
blood	UBERON:0000178	51.34	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	51.00	silver quality
duodenum	UBERON:0002114	50.33	gold quality
Brodmann (1909) area 9	UBERON:0013540	50.33	silver quality
intestine	UBERON:0000160	50.10	gold quality
prefrontal cortex	UBERON:0000451	48.97	silver quality
islet of Langerhans	UBERON:0000006	48.18	gold quality
vermiform appendix	UBERON:0001154	47.91	gold quality
gall bladder	UBERON:0002110	47.63	silver quality
primary visual cortex	UBERON:0002436	47.23	silver quality
muscle of leg	UBERON:0001383	46.82	gold quality
small intestine	UBERON:0002108	46.82	gold quality
pancreas	UBERON:0001264	46.75	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.