LINC02293

Summary

LINC02293 (long intergenic non-protein coding RNA 2293, HGNC:53209) is a long non-coding RNA gene on chromosome 14q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53209
Approved symbol	LINC02293
Name	long intergenic non-protein coding RNA 2293
Location	14q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000257185
Ensembl biotype	lncRNA
Entrez	102724890
RNAcentral	URS000075D87B — lncRNA, 651 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000548335, ENST00000548385, ENST00000653199, ENST00000660737, ENST00000661868, ENST00000662232, ENST00000662892, ENST00000664061, ENST00000671365

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000548335 — 5 exons

Exon	Start	End
ENSE00002326061	26820522	26820703
ENSE00002341272	26818704	26818780
ENSE00002369204	26816920	26817046
ENSE00002372901	26812233	26812396
ENSE00002423687	26809417	26809440

Expression profiles

Bgee: expression breadth broad, 91 present calls, max score 84.01.

Top tissues by expression

91 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.01	gold quality
mucosa of transverse colon	UBERON:0004991	75.42	gold quality
colonic epithelium	UBERON:0000397	74.85	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.34	gold quality
left testis	UBERON:0004533	68.10	gold quality
muscle tissue	UBERON:0002385	67.41	gold quality
testis	UBERON:0000473	67.38	gold quality
ventricular zone	UBERON:0003053	67.32	gold quality
right testis	UBERON:0004534	65.56	gold quality
rectum	UBERON:0001052	64.72	gold quality
hypothalamus	UBERON:0001898	63.04	gold quality
transverse colon	UBERON:0001157	62.11	gold quality
cortical plate	UBERON:0005343	60.35	silver quality
colon	UBERON:0001155	60.03	gold quality
intestine	UBERON:0000160	57.94	gold quality
amygdala	UBERON:0001876	56.90	gold quality
cerebellar cortex	UBERON:0002129	56.54	gold quality
cerebellar hemisphere	UBERON:0002245	56.47	gold quality
substantia nigra	UBERON:0002038	56.32	gold quality
islet of Langerhans	UBERON:0000006	55.13	gold quality
right hemisphere of cerebellum	UBERON:0014890	54.91	gold quality
calcaneal tendon	UBERON:0003701	54.67	gold quality
prefrontal cortex	UBERON:0000451	54.32	gold quality
endometrium	UBERON:0001295	54.15	gold quality
Ammon’s horn	UBERON:0001954	54.07	gold quality
muscle layer of sigmoid colon	UBERON:0035805	54.06	gold quality
adult mammalian kidney	UBERON:0000082	54.00	gold quality
monocyte	CL:0000576	53.58	gold quality
multicellular organism	UBERON:0000468	53.43	gold quality
brain	UBERON:0000955	53.15	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.76

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.