LINC02294

Summary

LINC02294 (long intergenic non-protein coding RNA 2294, HGNC:53210) is a long non-coding RNA gene on chromosome 14q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53210
Approved symbol	LINC02294
Name	long intergenic non-protein coding RNA 2294
Location	14q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000257845
Ensembl biotype	lncRNA
Entrez	101927062
RNAcentral	URS000075B8FC — lncRNA, 510 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000549330

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000549330 — 4 exons

Exon	Start	End
ENSE00002342008	26820692	26820790
ENSE00002390141	26808722	26808810
ENSE00002399652	26775495	26775699
ENSE00002404213	26822004	26822107

Expression profiles

Bgee: expression breadth broad, 65 present calls, max score 94.62.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0106 / max 12.8163, expressed in 3 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
142688	0.0067	2
142687	0.0039	2

Top tissues by expression

71 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	94.62	gold quality
adult mammalian kidney	UBERON:0000082	83.13	gold quality
kidney	UBERON:0002113	81.32	gold quality
cortex of kidney	UBERON:0001225	75.45	gold quality
quadriceps femoris	UBERON:0001377	69.42	gold quality
skeletal muscle tissue	UBERON:0001134	68.45	silver quality
bone marrow	UBERON:0002371	67.79	silver quality
cerebellar vermis	UBERON:0004720	67.75	gold quality
spleen	UBERON:0002106	66.21	silver quality
metanephros cortex	UBERON:0010533	65.28	gold quality
thymus	UBERON:0002370	63.38	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	60.83	gold quality
rectum	UBERON:0001052	55.76	gold quality
prefrontal cortex	UBERON:0000451	55.68	gold quality
monocyte	CL:0000576	53.86	gold quality
liver	UBERON:0002107	53.68	gold quality
lymph node	UBERON:0000029	52.52	gold quality
blood	UBERON:0000178	52.18	silver quality
calcaneal tendon	UBERON:0003701	51.94	gold quality
tonsil	UBERON:0002372	51.85	gold quality
corpus callosum	UBERON:0002336	48.52	silver quality
colon	UBERON:0001155	48.35	gold quality
Brodmann (1909) area 9	UBERON:0013540	48.06	gold quality
muscle layer of sigmoid colon	UBERON:0035805	48.00	gold quality
transverse colon	UBERON:0001157	47.96	gold quality
right lobe of liver	UBERON:0001114	47.87	silver quality
islet of Langerhans	UBERON:0000006	47.65	gold quality
intestine	UBERON:0000160	47.62	gold quality
gastrocnemius	UBERON:0001388	46.97	gold quality
pancreas	UBERON:0001264	45.99	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.73

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.