LINC02296

Summary

LINC02296 (long intergenic non-protein coding RNA 2296, HGNC:53212) is a long non-coding RNA gene on chromosome 14q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53212
Approved symbol	LINC02296
Name	long intergenic non-protein coding RNA 2296
Location	14q31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258859
Ensembl biotype	lncRNA
Entrez	105370610
RNAcentral	URS0002A54508 — lncRNA, 2390 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000557070, ENST00000716942, ENST00000716943, ENST00000716944

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000557070 — 7 exons

Exon	Start	End
ENSE00002451675	87440190	87440261
ENSE00002463136	87369740	87369832
ENSE00002465452	87406380	87406487
ENSE00002482047	87368446	87368526
ENSE00002509966	87572961	87573022
ENSE00002512567	87440943	87441029
ENSE00002512827	87353070	87353110

Expression profiles

Bgee: expression breadth broad, 100 present calls, max score 86.58.

Top tissues by expression

100 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.58	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.41	gold quality
myometrium	UBERON:0001296	77.92	gold quality
smooth muscle tissue	UBERON:0001135	77.84	gold quality
endometrium	UBERON:0001295	75.85	gold quality
body of uterus	UBERON:0009853	75.45	gold quality
right hemisphere of cerebellum	UBERON:0014890	74.87	gold quality
right frontal lobe	UBERON:0002810	72.74	gold quality
Brodmann (1909) area 9	UBERON:0013540	71.26	gold quality
superior frontal gyrus	UBERON:0002661	70.35	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	68.83	gold quality
primary visual cortex	UBERON:0002436	68.78	gold quality
frontal cortex	UBERON:0001870	68.10	gold quality
cerebellar hemisphere	UBERON:0002245	65.99	gold quality
cerebral cortex	UBERON:0000956	64.83	gold quality
corpus callosum	UBERON:0002336	64.16	gold quality
prefrontal cortex	UBERON:0000451	62.30	gold quality
calcaneal tendon	UBERON:0003701	61.19	gold quality
liver	UBERON:0002107	58.83	gold quality
brain	UBERON:0000955	58.29	gold quality
monocyte	CL:0000576	57.28	gold quality
left uterine tube	UBERON:0001303	55.88	gold quality
uterine cervix	UBERON:0000002	55.53	gold quality
endocervix	UBERON:0000458	53.28	gold quality
placenta	UBERON:0001987	53.16	gold quality
fallopian tube	UBERON:0003889	52.80	gold quality
anterior cingulate cortex	UBERON:0009835	52.66	gold quality
multicellular organism	UBERON:0000468	52.03	gold quality
adrenal tissue	UBERON:0018303	51.48	gold quality
islet of Langerhans	UBERON:0000006	50.77	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.