LINC02299

Summary

LINC02299 (long intergenic non-protein coding RNA 2299, HGNC:53218) is a long non-coding RNA gene on chromosome 14q32.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53218
Approved symbol	LINC02299
Name	long intergenic non-protein coding RNA 2299
Location	14q32.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258979
Ensembl biotype	lncRNA
Entrez	105370646
RNAcentral	URS000054AD9E — lncRNA, 430 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000556669, ENST00000650059, ENST00000654843, ENST00000664687, ENST00000838090

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000556669 — 4 exons

Exon	Start	End
ENSE00002454397	96753269	96753326
ENSE00002497262	96744161	96744269
ENSE00004259174	96790372	96790640
ENSE00004259176	96741166	96741211

Expression profiles

Bgee: expression breadth broad, 80 present calls, max score 81.87.

Top tissues by expression

80 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.87	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.91	gold quality
cortex of kidney	UBERON:0001225	71.18	gold quality
right uterine tube	UBERON:0001302	67.76	gold quality
ventricular zone	UBERON:0003053	67.21	gold quality
cortical plate	UBERON:0005343	65.51	gold quality
ganglionic eminence	UBERON:0004023	63.30	gold quality
nucleus accumbens	UBERON:0001882	62.10	gold quality
putamen	UBERON:0001874	61.34	gold quality
caudate nucleus	UBERON:0001873	60.15	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	58.66	gold quality
fallopian tube	UBERON:0003889	56.67	gold quality
gastrocnemius	UBERON:0001388	55.25	gold quality
blood	UBERON:0000178	55.20	gold quality
myometrium	UBERON:0001296	55.04	gold quality
prefrontal cortex	UBERON:0000451	54.34	gold quality
lymph node	UBERON:0000029	54.09	gold quality
monocyte	CL:0000576	53.73	gold quality
islet of Langerhans	UBERON:0000006	53.71	gold quality
primary visual cortex	UBERON:0002436	53.03	gold quality
bone marrow	UBERON:0002371	50.50	silver quality
multicellular organism	UBERON:0000468	48.48	gold quality
adenohypophysis	UBERON:0002196	48.45	gold quality
frontal cortex	UBERON:0001870	47.57	gold quality
endometrium	UBERON:0001295	47.51	gold quality
Ammon’s horn	UBERON:0001954	47.22	gold quality
upper lobe of left lung	UBERON:0008952	46.90	gold quality
heart left ventricle	UBERON:0002084	46.66	gold quality
left uterine tube	UBERON:0001303	46.61	gold quality
cerebral cortex	UBERON:0000956	46.49	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.