LINC02309

Summary

LINC02309 (long intergenic non-protein coding RNA 2309, HGNC:53228) is a long non-coding RNA gene on chromosome 14q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53228
Approved symbol	LINC02309
Name	long intergenic non-protein coding RNA 2309
Location	14q31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258994
Ensembl biotype	lncRNA
Entrez	105370607
RNAcentral	URS0002A4222F — lncRNA, 498 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000553679, ENST00000730143, ENST00000730144, ENST00000730145

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000553679 — 3 exons

Exon	Start	End
ENSE00002447284	86401212	86401285
ENSE00002456303	86332376	86332433
ENSE00002508348	86336412	86336486

Expression profiles

Bgee: expression breadth broad, 91 present calls, max score 83.55.

Top tissues by expression

96 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.55	gold quality
bone marrow	UBERON:0002371	80.06	silver quality
thymus	UBERON:0002370	76.59	silver quality
sural nerve	UBERON:0015488	74.21	gold quality
skeletal muscle tissue	UBERON:0001134	73.84	silver quality
superior frontal gyrus	UBERON:0002661	71.56	gold quality
quadriceps femoris	UBERON:0001377	69.42	gold quality
cerebellar vermis	UBERON:0004720	67.75	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	67.13	gold quality
right testis	UBERON:0004534	67.06	gold quality
left testis	UBERON:0004533	66.97	gold quality
calcaneal tendon	UBERON:0003701	66.61	gold quality
monocyte	CL:0000576	66.44	gold quality
testis	UBERON:0000473	66.37	gold quality
prefrontal cortex	UBERON:0000451	66.12	gold quality
urinary bladder	UBERON:0001255	65.50	gold quality
islet of Langerhans	UBERON:0000006	65.40	gold quality
blood	UBERON:0000178	65.20	gold quality
heart left ventricle	UBERON:0002084	64.04	gold quality
muscle of leg	UBERON:0001383	63.09	gold quality
gastrocnemius	UBERON:0001388	62.16	gold quality
placenta	UBERON:0001987	61.92	gold quality
right adrenal gland cortex	UBERON:0035827	61.54	gold quality
endometrium	UBERON:0001295	60.91	gold quality
pancreas	UBERON:0001264	59.69	gold quality
thoracic aorta	UBERON:0001515	59.15	gold quality
tibial artery	UBERON:0007610	59.11	gold quality
ascending aorta	UBERON:0001496	59.09	gold quality
Ammon’s horn	UBERON:0001954	58.48	gold quality
body of pancreas	UBERON:0001150	58.26	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.