LINC02313

Summary

LINC02313 (long intergenic non-protein coding RNA 2313, HGNC:53232) is a long non-coding RNA gene on chromosome 14q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53232
Approved symbol	LINC02313
Name	long intergenic non-protein coding RNA 2313
Location	14q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258474
Ensembl biotype	lncRNA
Entrez	105370439
RNAcentral	URS0000BC4568 — lncRNA, 462 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 16 — 16 lncRNA

ENST00000553330, ENST00000556949, ENST00000735523, ENST00000735524, ENST00000735525, ENST00000735526, ENST00000735527, ENST00000735528, ENST00000735529, ENST00000735530, ENST00000735531, ENST00000735532, ENST00000735533, ENST00000735534, ENST00000735535, ENST00000735766

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000553330 — 2 exons

Exon	Start	End
ENSE00004068228	31950089	31950385
ENSE00004068240	31944370	31945108

Expression profiles

Bgee: expression breadth ubiquitous, 107 present calls, max score 85.27.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0366 / max 7.4779, expressed in 16 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
139106	0.0254	14
139107	0.0112	7

Top tissues by expression

109 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cerebellar vermis	UBERON:0004720	85.27	gold quality
quadriceps femoris	UBERON:0001377	84.13	gold quality
skeletal muscle tissue	UBERON:0001134	80.32	gold quality
thymus	UBERON:0002370	76.51	silver quality
mucosa of transverse colon	UBERON:0004991	73.94	gold quality
rectum	UBERON:0001052	73.03	gold quality
duodenum	UBERON:0002114	72.67	gold quality
ventricular zone	UBERON:0003053	66.06	gold quality
gall bladder	UBERON:0002110	65.95	gold quality
monocyte	CL:0000576	65.92	gold quality
transverse colon	UBERON:0001157	65.89	gold quality
small intestine	UBERON:0002108	65.08	gold quality
ganglionic eminence	UBERON:0004023	64.98	gold quality
small intestine Peyer’s patch	UBERON:0003454	64.21	gold quality
muscle tissue	UBERON:0002385	63.23	gold quality
intestine	UBERON:0000160	63.16	gold quality
colon	UBERON:0001155	61.90	gold quality
calcaneal tendon	UBERON:0003701	58.89	gold quality
endometrium	UBERON:0001295	58.31	gold quality
lymph node	UBERON:0000029	56.66	gold quality
islet of Langerhans	UBERON:0000006	56.30	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.04	gold quality
bone marrow	UBERON:0002371	56.02	silver quality
prefrontal cortex	UBERON:0000451	55.97	gold quality
tonsil	UBERON:0002372	53.55	gold quality
fallopian tube	UBERON:0003889	52.77	gold quality
smooth muscle tissue	UBERON:0001135	51.58	gold quality
pancreas	UBERON:0001264	51.55	gold quality
blood	UBERON:0000178	51.48	gold quality
urinary bladder	UBERON:0001255	51.20	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.