LINC02320

Summary

LINC02320 (long intergenic non-protein coding RNA 2320, HGNC:53239) is a long non-coding RNA gene on chromosome 14q32.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53239
Approved symbol	LINC02320
Name	long intergenic non-protein coding RNA 2320
Location	14q32.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258404
Ensembl biotype	lncRNA
Entrez	105370676
RNAcentral	URS00026A1E99 — lncRNA, 2103 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000553270, ENST00000557778, ENST00000716020, ENST00000755067, ENST00000755068

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000553270 — 2 exons

Exon	Start	End
ENSE00002462939	101628984	101629404
ENSE00002528576	101632413	101632530

Expression profiles

Bgee: expression breadth ubiquitous, 101 present calls, max score 69.40.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.5917 / max 105.6168, expressed in 163 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
144973	0.2157	93
144972	0.2041	65
144971	0.1048	37
144970	0.0671	18

Top tissues by expression

101 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
lymph node	UBERON:0000029	69.40	gold quality
ganglionic eminence	UBERON:0004023	69.39	gold quality
tonsil	UBERON:0002372	64.12	gold quality
blood	UBERON:0000178	63.12	gold quality
vermiform appendix	UBERON:0001154	62.28	gold quality
granulocyte	CL:0000094	61.91	gold quality
colonic epithelium	UBERON:0000397	61.65	silver quality
nucleus accumbens	UBERON:0001882	61.45	gold quality
bone marrow	UBERON:0002371	60.37	gold quality
gall bladder	UBERON:0002110	59.82	gold quality
prefrontal cortex	UBERON:0000451	59.61	gold quality
rectum	UBERON:0001052	58.04	gold quality
superior frontal gyrus	UBERON:0002661	56.61	gold quality
islet of Langerhans	UBERON:0000006	56.11	gold quality
putamen	UBERON:0001874	56.08	gold quality
caudate nucleus	UBERON:0001873	56.02	gold quality
frontal cortex	UBERON:0001870	55.36	gold quality
fallopian tube	UBERON:0003889	55.00	gold quality
Brodmann (1909) area 9	UBERON:0013540	53.99	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	53.54	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	53.52	gold quality
cerebral cortex	UBERON:0000956	53.49	gold quality
brain	UBERON:0000955	53.01	gold quality
urinary bladder	UBERON:0001255	52.86	gold quality
primary visual cortex	UBERON:0002436	52.80	gold quality
subcutaneous adipose tissue	UBERON:0002190	52.65	gold quality
small intestine	UBERON:0002108	52.14	gold quality
skin of leg	UBERON:0001511	51.98	gold quality
small intestine Peyer’s patch	UBERON:0003454	51.90	gold quality
fundus of stomach	UBERON:0001160	51.69	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.99

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.