LINC02325

Summary

LINC02325 (long intergenic non-protein coding RNA 2325, HGNC:53245) is a long non-coding RNA gene on chromosome 14q32.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53245
Approved symbol	LINC02325
Name	long intergenic non-protein coding RNA 2325
Location	14q32.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000246084
Ensembl biotype	lncRNA
Entrez	101929241
RNAcentral	URS000075DF4F — lncRNA, 1193 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 21 — 21 lncRNA

ENST00000499910, ENST00000554260, ENST00000554862, ENST00000653473, ENST00000655920, ENST00000662988, ENST00000663980, ENST00000668398, ENST00000671156, ENST00000673994, ENST00000688997, ENST00000702344, ENST00000702356, ENST00000807762, ENST00000807763, ENST00000807764, ENST00000807765, ENST00000807766, ENST00000807767, ENST00000807768, ENST00000835862

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000499910 — 3 exons

Exon	Start	End
ENSE00001974423	97461804	97462332
ENSE00001991297	97463632	97464159
ENSE00004202142	97458827	97458927

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 73.47.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.7785 / max 57.3833, expressed in 107 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
141355	0.7785	107

Top tissues by expression

223 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	73.47	gold quality
granulocyte	CL:0000094	73.32	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.89	gold quality
vermiform appendix	UBERON:0001154	69.93	gold quality
lymph node	UBERON:0000029	69.03	gold quality
colonic epithelium	UBERON:0000397	67.92	gold quality
cortical plate	UBERON:0005343	64.16	gold quality
caecum	UBERON:0001153	63.52	gold quality
ventricular zone	UBERON:0003053	63.00	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.98	gold quality
blood	UBERON:0000178	61.31	gold quality
ganglionic eminence	UBERON:0004023	60.13	gold quality
spleen	UBERON:0002106	59.52	gold quality
calcaneal tendon	UBERON:0003701	58.53	gold quality
leukocyte	CL:0000738	57.85	gold quality
mucosa of transverse colon	UBERON:0004991	56.73	gold quality
small intestine Peyer’s patch	UBERON:0003454	56.02	gold quality
monocyte	CL:0000576	55.78	gold quality
lower lobe of lung	UBERON:0008949	55.73	silver quality
tonsil	UBERON:0002372	54.82	gold quality
small intestine	UBERON:0002108	54.73	gold quality
left testis	UBERON:0004533	54.48	gold quality
gall bladder	UBERON:0002110	53.81	gold quality
testis	UBERON:0000473	53.20	gold quality
right testis	UBERON:0004534	52.89	gold quality
prefrontal cortex	UBERON:0000451	52.84	gold quality
rectum	UBERON:0001052	51.40	gold quality
nucleus accumbens	UBERON:0001882	51.29	gold quality
sperm	CL:0000019	51.22	gold quality
right coronary artery	UBERON:0001625	49.48	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.50

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.