LINC02327

Summary

LINC02327 (long intergenic non-protein coding RNA 2327, HGNC:53247) is a long non-coding RNA gene on chromosome 14q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53247
Approved symbol	LINC02327
Name	long intergenic non-protein coding RNA 2327
Location	14q12
Locus type	RNA, long non-coding
Status	Approved
Aliases	uc.362
Ensembl gene	ENSG00000258038
Ensembl biotype	lncRNA
Entrez	102724917
RNAcentral	URS00026A245D — lncRNA, 831 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 63 — 63 lncRNA

ENST00000548087, ENST00000548775, ENST00000550122, ENST00000550827, ENST00000550990, ENST00000551227, ENST00000551588, ENST00000650678, ENST00000652058, ENST00000652140, ENST00000652634, ENST00000655423, ENST00000656401, ENST00000657083, ENST00000657120, ENST00000657147, ENST00000658814, ENST00000660501, ENST00000660700, ENST00000660765, ENST00000664085, ENST00000665952, ENST00000667065, ENST00000668716, ENST00000670211, ENST00000671154, ENST00000716669, ENST00000716696, ENST00000716697, ENST00000716698, ENST00000716699, ENST00000716700, ENST00000730563, ENST00000730564, ENST00000730565, ENST00000730566, ENST00000730567, ENST00000730568, ENST00000730569, ENST00000730570, ENST00000730571, ENST00000730572, ENST00000730573, ENST00000730574, ENST00000730575, ENST00000730576, ENST00000730577, ENST00000730578, ENST00000730579, ENST00000730580, ENST00000730581, ENST00000730582, ENST00000730583, ENST00000730584, ENST00000730585, ENST00000730586, ENST00000730587, ENST00000730588, ENST00000730589, ENST00000730590, ENST00000730591, ENST00000730592, ENST00000730593

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000548087 — 3 exons

Exon	Start	End
ENSE00002355005	28830247	28830502
ENSE00002359071	28832006	28832060
ENSE00002418793	28837253	28837717

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 87.13.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.6294 / max 40.7671, expressed in 93 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
139087	0.6294	93

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.13	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.74	gold quality
quadriceps femoris	UBERON:0001377	83.74	gold quality
cerebellar vermis	UBERON:0004720	82.98	gold quality
placenta	UBERON:0001987	73.29	gold quality
testis	UBERON:0000473	72.36	gold quality
left testis	UBERON:0004533	71.11	gold quality
thymus	UBERON:0002370	70.64	silver quality
right testis	UBERON:0004534	70.37	gold quality
colonic epithelium	UBERON:0000397	70.18	silver quality
bone marrow cell	CL:0002092	68.19	silver quality
ventricular zone	UBERON:0003053	63.30	gold quality
cortical plate	UBERON:0005343	62.16	gold quality
sural nerve	UBERON:0015488	61.20	silver quality
ganglionic eminence	UBERON:0004023	60.96	gold quality
bone marrow	UBERON:0002371	59.82	gold quality
skeletal muscle tissue	UBERON:0001134	59.14	silver quality
stromal cell of endometrium	CL:0002255	58.30	gold quality
muscle tissue	UBERON:0002385	57.59	silver quality
leukocyte	CL:0000738	56.70	gold quality
mucosa of transverse colon	UBERON:0004991	55.72	gold quality
monocyte	CL:0000576	55.67	gold quality
blood	UBERON:0000178	55.23	gold quality
hindlimb stylopod muscle	UBERON:0004252	55.23	gold quality
lymph node	UBERON:0000029	54.56	gold quality
endometrium	UBERON:0001295	52.34	gold quality
duodenum	UBERON:0002114	52.23	gold quality
muscle of leg	UBERON:0001383	51.84	gold quality
gastrocnemius	UBERON:0001388	51.69	gold quality
vermiform appendix	UBERON:0001154	51.64	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.74

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.