LINC02330

Summary

LINC02330 (long intergenic non-protein coding RNA 2330, HGNC:53250) is a long non-coding RNA gene on chromosome 14q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53250
Approved symbol	LINC02330
Name	long intergenic non-protein coding RNA 2330
Location	14q31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258770
Ensembl biotype	lncRNA
Entrez	105370611
RNAcentral	URS000023709D — lncRNA, 555 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000557784

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000557784 — 3 exons

Exon	Start	End
ENSE00002441683	87635406	87635523
ENSE00002523526	87655131	87655294
ENSE00002531348	87634379	87634651

Expression profiles

Bgee: expression breadth broad, 68 present calls, max score 95.94.

Top tissues by expression

68 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	95.94	gold quality
ganglionic eminence	UBERON:0004023	63.77	gold quality
blood	UBERON:0000178	55.05	silver quality
islet of Langerhans	UBERON:0000006	54.82	gold quality
prefrontal cortex	UBERON:0000451	54.45	gold quality
primary visual cortex	UBERON:0002436	51.85	gold quality
placenta	UBERON:0001987	51.82	gold quality
monocyte	CL:0000576	49.94	silver quality
endometrium	UBERON:0001295	49.26	gold quality
superior frontal gyrus	UBERON:0002661	48.58	gold quality
right hemisphere of cerebellum	UBERON:0014890	47.96	gold quality
frontal cortex	UBERON:0001870	47.57	gold quality
heart left ventricle	UBERON:0002084	47.29	gold quality
gastrocnemius	UBERON:0001388	47.20	gold quality
myometrium	UBERON:0001296	46.71	gold quality
cerebellar hemisphere	UBERON:0002245	46.70	gold quality
body of uterus	UBERON:0009853	46.02	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	45.90	gold quality
cerebral cortex	UBERON:0000956	45.89	gold quality
lung	UBERON:0002048	45.84	gold quality
hypothalamus	UBERON:0001898	45.47	gold quality
upper lobe of left lung	UBERON:0008952	45.42	gold quality
brain	UBERON:0000955	45.39	gold quality
kidney	UBERON:0002113	45.31	silver quality
tibial artery	UBERON:0007610	45.30	silver quality
left ovary	UBERON:0002119	45.04	silver quality
nucleus accumbens	UBERON:0001882	44.80	gold quality
thyroid gland	UBERON:0002046	44.72	gold quality
prostate gland	UBERON:0002367	44.39	silver quality
Brodmann (1909) area 9	UBERON:0013540	44.29	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.