LINC02331

Summary

LINC02331 (long intergenic non-protein coding RNA 2331, HGNC:53251) is a long non-coding RNA gene on chromosome 14q22.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53251
Approved symbol	LINC02331
Name	long intergenic non-protein coding RNA 2331
Location	14q22.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235269
Ensembl biotype	lncRNA
Entrez	105370503
RNAcentral	URS00026A1B41 — lncRNA, 2379 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000418927, ENST00000728987, ENST00000728988, ENST00000728989, ENST00000728990, ENST00000728991

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000418927 — 6 exons

Exon	Start	End
ENSE00001621865	53793254	53793396
ENSE00001646248	53849722	53849970
ENSE00001783706	53768801	53768963
ENSE00003878278	53750002	53750100
ENSE00004056037	53685135	53686608
ENSE00004056047	53850695	53850882

Expression profiles

Bgee: expression breadth broad, 71 present calls, max score 76.36.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2479 / max 51.7216, expressed in 46 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
143292	0.1639	37
143291	0.0780	27
143290	0.0059	3

Top tissues by expression

71 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
gall bladder	UBERON:0002110	76.36	gold quality
islet of Langerhans	UBERON:0000006	72.07	gold quality
endometrium	UBERON:0001295	60.31	gold quality
pancreas	UBERON:0001264	59.98	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.88	silver quality
right uterine tube	UBERON:0001302	59.14	gold quality
muscle of leg	UBERON:0001383	58.59	silver quality
right frontal lobe	UBERON:0002810	55.30	gold quality
tonsil	UBERON:0002372	53.64	silver quality
myometrium	UBERON:0001296	53.12	gold quality
prefrontal cortex	UBERON:0000451	53.00	gold quality
endocervix	UBERON:0000458	52.86	gold quality
body of pancreas	UBERON:0001150	52.85	gold quality
fallopian tube	UBERON:0003889	52.79	gold quality
liver	UBERON:0002107	52.12	gold quality
left ovary	UBERON:0002119	52.00	gold quality
cerebellar cortex	UBERON:0002129	50.76	gold quality
cerebellar hemisphere	UBERON:0002245	50.64	gold quality
right lobe of liver	UBERON:0001114	50.13	gold quality
adult mammalian kidney	UBERON:0000082	50.03	gold quality
saliva-secreting gland	UBERON:0001044	49.64	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.43	gold quality
right hemisphere of cerebellum	UBERON:0014890	49.31	gold quality
lymph node	UBERON:0000029	48.38	silver quality
kidney	UBERON:0002113	48.04	gold quality
blood	UBERON:0000178	47.69	gold quality
minor salivary gland	UBERON:0001830	47.55	gold quality
placenta	UBERON:0001987	46.97	gold quality
ovary	UBERON:0000992	46.09	gold quality
left uterine tube	UBERON:0001303	45.18	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.