LINC02335

Summary

LINC02335 (long intergenic non-protein coding RNA 2335, HGNC:53255) is a long non-coding RNA gene on chromosome 13q21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53255
Approved symbol	LINC02335
Name	long intergenic non-protein coding RNA 2335
Location	13q21.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000278630
Ensembl biotype	lncRNA
Entrez	124903234
RNAcentral	URS00026A1F71 — lncRNA, 4759 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000616578, ENST00000732192, ENST00000732193, ENST00000732194, ENST00000732195, ENST00000732196, ENST00000732197, ENST00000732198

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000616578 — 4 exons

Exon	Start	End
ENSE00003734234	55106770	55106836
ENSE00004062290	55062872	55063002
ENSE00004062292	55039792	55039881
ENSE00004062294	55160957	55161491

Expression profiles

Bgee: expression breadth broad, 29 present calls, max score 95.33.

Top tissues by expression

29 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	95.33	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	84.00	gold quality
cortex of kidney	UBERON:0001225	69.38	gold quality
cortical plate	UBERON:0005343	67.19	gold quality
tonsil	UBERON:0002372	62.14	silver quality
monocyte	CL:0000576	57.42	gold quality
prefrontal cortex	UBERON:0000451	57.05	gold quality
sural nerve	UBERON:0015488	54.81	silver quality
islet of Langerhans	UBERON:0000006	52.96	gold quality
prostate gland	UBERON:0002367	51.26	gold quality
caudate nucleus	UBERON:0001873	51.25	gold quality
blood	UBERON:0000178	49.67	silver quality
multicellular organism	UBERON:0000468	49.37	gold quality
tibial nerve	UBERON:0001323	45.76	silver quality
frontal cortex	UBERON:0001870	44.39	gold quality
cerebral cortex	UBERON:0000956	43.44	gold quality
gastrocnemius	UBERON:0001388	42.63	silver quality
anterior cingulate cortex	UBERON:0009835	42.17	silver quality
Brodmann (1909) area 9	UBERON:0013540	40.52	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	40.06	silver quality
omental fat pad	UBERON:0010414	38.86	silver quality
amygdala	UBERON:0001876	38.56	silver quality
Ammon’s horn	UBERON:0001954	37.88	silver quality
substantia nigra	UBERON:0002038	37.42	silver quality
skin of leg	UBERON:0001511	36.81	silver quality
nucleus accumbens	UBERON:0001882	36.44	silver quality
right frontal lobe	UBERON:0002810	35.30	silver quality
testis	UBERON:0000473	33.14	gold quality
left testis	UBERON:0004533	27.42	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.