LINC02341

Summary

LINC02341 (long intergenic non-protein coding RNA 2341, HGNC:53261) is a long non-coding RNA gene on chromosome 13q14.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53261
Approved symbol	LINC02341
Name	long intergenic non-protein coding RNA 2341
Location	13q14.11
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000283554
Ensembl biotype	lncRNA
Entrez	105370177
RNAcentral	URS0000A773D6 — lncRNA, 824 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000637043, ENST00000637462, ENST00000765075

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000637043 — 4 exons

Exon	Start	End
ENSE00003791981	42424892	42424978
ENSE00003794056	42437318	42437472
ENSE00003799140	42435200	42435293
ENSE00004122634	42485469	42486214

Expression profiles

Bgee: expression breadth broad, 87 present calls, max score 75.14.

Top tissues by expression

87 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.14	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.12	gold quality
lymph node	UBERON:0000029	61.52	gold quality
sural nerve	UBERON:0015488	59.60	silver quality
placenta	UBERON:0001987	57.37	gold quality
tonsil	UBERON:0002372	57.21	gold quality
myometrium	UBERON:0001296	56.91	gold quality
left coronary artery	UBERON:0001626	55.55	gold quality
vermiform appendix	UBERON:0001154	54.51	gold quality
liver	UBERON:0002107	53.69	silver quality
left ovary	UBERON:0002119	51.04	gold quality
kidney	UBERON:0002113	50.79	gold quality
duodenum	UBERON:0002114	50.64	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.39	gold quality
blood	UBERON:0000178	50.01	silver quality
urinary bladder	UBERON:0001255	49.85	gold quality
monocyte	CL:0000576	49.84	silver quality
adult mammalian kidney	UBERON:0000082	49.55	gold quality
prefrontal cortex	UBERON:0000451	49.25	gold quality
adrenal tissue	UBERON:0018303	49.19	gold quality
bone marrow	UBERON:0002371	48.53	silver quality
vagina	UBERON:0000996	48.29	gold quality
islet of Langerhans	UBERON:0000006	48.21	gold quality
endometrium	UBERON:0001295	47.51	silver quality
superior frontal gyrus	UBERON:0002661	47.07	silver quality
heart	UBERON:0000948	46.63	gold quality
Brodmann (1909) area 9	UBERON:0013540	46.33	gold quality
muscle of leg	UBERON:0001383	46.26	silver quality
heart left ventricle	UBERON:0002084	46.13	silver quality
hypothalamus	UBERON:0001898	45.78	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.59

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.