LINC02345

Summary

LINC02345 (long intergenic non-protein coding RNA 2345, HGNC:53267) is a long non-coding RNA gene on chromosome 15q14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53267
Approved symbol	LINC02345
Name	long intergenic non-protein coding RNA 2345
Location	15q14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259225
Ensembl biotype	lncRNA
Entrez	101928227
RNAcentral	URS0000077027 — lncRNA, 405 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 20 — 20 lncRNA

ENST00000557883, ENST00000558081, ENST00000558897, ENST00000559992, ENST00000658097, ENST00000669882, ENST00000687612, ENST00000691086, ENST00000702145, ENST00000728212, ENST00000728213, ENST00000728214, ENST00000728215, ENST00000728216, ENST00000728217, ENST00000728218, ENST00000728219, ENST00000728220, ENST00000728221, ENST00000728222

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000557883 — 3 exons

Exon	Start	End
ENSE00002540645	38020192	38020532
ENSE00003984867	38024681	38025022
ENSE00004054502	38004721	38004832

Expression profiles

Bgee: expression breadth ubiquitous, 150 present calls, max score 96.96.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1486 / max 36.4478, expressed in 49 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
145851	0.1036	31
145850	0.0450	16

Top tissues by expression

235 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right uterine tube	UBERON:0001302	96.96	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	88.33	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.42	gold quality
fallopian tube	UBERON:0003889	77.90	gold quality
oviduct epithelium	UBERON:0004804	77.83	gold quality
bronchial epithelial cell	CL:0002328	73.98	gold quality
granulocyte	CL:0000094	73.01	gold quality
leukocyte	CL:0000738	72.81	gold quality
monocyte	CL:0000576	72.72	gold quality
bronchus	UBERON:0002185	72.47	gold quality
sural nerve	UBERON:0015488	67.48	silver quality
right lung	UBERON:0002167	67.32	gold quality
upper lobe of left lung	UBERON:0008952	65.28	gold quality
calcaneal tendon	UBERON:0003701	64.92	gold quality
ventricular zone	UBERON:0003053	63.99	gold quality
nasal cavity mucosa	UBERON:0001826	63.86	gold quality
upper lobe of lung	UBERON:0008948	62.89	gold quality
endocervix	UBERON:0000458	60.37	gold quality
left uterine tube	UBERON:0001303	60.31	gold quality
left testis	UBERON:0004533	59.73	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.97	gold quality
skin of abdomen	UBERON:0001416	58.58	gold quality
right testis	UBERON:0004534	58.50	gold quality
testis	UBERON:0000473	58.44	gold quality
lung	UBERON:0002048	58.39	gold quality
right coronary artery	UBERON:0001625	58.32	gold quality
corpus callosum	UBERON:0002336	57.94	gold quality
gall bladder	UBERON:0002110	56.17	gold quality
left coronary artery	UBERON:0001626	56.00	gold quality
epithelium of nasopharynx	UBERON:0001951	55.83	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	8.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.