LINC02347

Summary

LINC02347 (long intergenic non-protein coding RNA 2347, HGNC:53269) is a long non-coding RNA gene on chromosome 12q24.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53269
Approved symbol	LINC02347
Name	long intergenic non-protein coding RNA 2347
Location	12q24.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000214043
Ensembl biotype	lncRNA
Entrez	100128554
RNAcentral	URS0000812179 — lncRNA, 2468 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 27 — 27 lncRNA

ENST00000397346, ENST00000539969, ENST00000540774, ENST00000544759, ENST00000545767, ENST00000653244, ENST00000653837, ENST00000654221, ENST00000654279, ENST00000655151, ENST00000655565, ENST00000656915, ENST00000657054, ENST00000661190, ENST00000661524, ENST00000662173, ENST00000663153, ENST00000663560, ENST00000663607, ENST00000664729, ENST00000664858, ENST00000665178, ENST00000665686, ENST00000668022, ENST00000668646, ENST00000670226, ENST00000670916

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000397346 — 12 exons

Exon	Start	End
ENSE00001528266	126472586	126472790
ENSE00001528269	126470661	126470815
ENSE00001528271	126469732	126469885
ENSE00001528275	126468758	126469107
ENSE00001528279	126466549	126466727
ENSE00001751188	126442966	126443027
ENSE00001796657	126442481	126442588
ENSE00002254581	126457933	126458541
ENSE00003521874	126444885	126445053
ENSE00003721249	126462718	126462825
ENSE00003721549	126447979	126448061
ENSE00003739449	126465714	126465989

Expression profiles

Bgee: expression breadth broad, 92 present calls, max score 76.86.

Top tissues by expression

192 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	76.86	silver quality
body of pancreas	UBERON:0001150	68.30	gold quality
Brodmann (1909) area 9	UBERON:0013540	67.70	gold quality
right hemisphere of cerebellum	UBERON:0014890	65.70	gold quality
right frontal lobe	UBERON:0002810	65.55	gold quality
prefrontal cortex	UBERON:0000451	64.61	gold quality
cerebellar hemisphere	UBERON:0002245	63.89	gold quality
left testis	UBERON:0004533	63.65	gold quality
anterior cingulate cortex	UBERON:0009835	63.58	gold quality
pancreas	UBERON:0001264	63.30	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	62.99	gold quality
right testis	UBERON:0004534	61.84	gold quality
buccal mucosa cell	CL:0002336	61.56	gold quality
testis	UBERON:0000473	61.42	gold quality
ventricular zone	UBERON:0003053	60.85	gold quality
neocortex	UBERON:0001950	60.62	gold quality
frontal cortex	UBERON:0001870	60.56	gold quality
ganglionic eminence	UBERON:0004023	58.10	gold quality
cerebral cortex	UBERON:0000956	57.31	gold quality
hypothalamus	UBERON:0001898	55.15	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.09	silver quality
forebrain	UBERON:0001890	53.64	gold quality
monocyte	CL:0000576	53.19	gold quality
brain	UBERON:0000955	52.85	gold quality
amygdala	UBERON:0001876	51.31	gold quality
minor salivary gland	UBERON:0001830	51.19	gold quality
saliva-secreting gland	UBERON:0001044	50.33	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.94	gold quality
mouth mucosa	UBERON:0003729	49.49	gold quality
tonsil	UBERON:0002372	49.40	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.07

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.