LINC02352

Summary

LINC02352 (long intergenic non-protein coding RNA 2352, HGNC:53274) is a long non-coding RNA gene on chromosome 15q13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53274
Approved symbol	LINC02352
Name	long intergenic non-protein coding RNA 2352
Location	15q13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259448
Ensembl biotype	lncRNA
Entrez	102725022
RNAcentral	URS0000A77336 — lncRNA, 1030 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 17 — 17 lncRNA

ENST00000557928, ENST00000559292, ENST00000654993, ENST00000724676, ENST00000724677, ENST00000724678, ENST00000724679, ENST00000724680, ENST00000724681, ENST00000724682, ENST00000724683, ENST00000724684, ENST00000724685, ENST00000724686, ENST00000724687, ENST00000724688, ENST00000724689

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000557928 — 2 exons

Exon	Start	End
ENSE00004047580	31215843	31216037
ENSE00004047596	31223995	31225007

Expression profiles

Bgee: expression breadth ubiquitous, 254 present calls, max score 97.83.

FANTOM5 (CAGE): breadth broad, TPM avg 1.4575 / max 87.2063, expressed in 680 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
145654	1.2994	626
145655	0.1581	88

Top tissues by expression

255 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
pancreatic ductal cell	CL:0002079	97.83	gold quality
kidney epithelium	UBERON:0004819	95.25	gold quality
upper arm skin	UBERON:0004263	94.64	gold quality
parotid gland	UBERON:0001831	93.05	gold quality
nasal cavity epithelium	UBERON:0005384	92.80	gold quality
epithelial cell of pancreas	CL:0000083	92.59	gold quality
lateral nuclear group of thalamus	UBERON:0002736	92.02	gold quality
vena cava	UBERON:0004087	91.89	gold quality
tendon of biceps brachii	UBERON:0008188	91.79	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	91.69	gold quality
left ventricle myocardium	UBERON:0006566	91.49	gold quality
heart right ventricle	UBERON:0002080	91.27	gold quality
myocardium	UBERON:0002349	90.84	gold quality
buccal mucosa cell	CL:0002336	90.37	gold quality
vastus lateralis	UBERON:0001379	89.10	gold quality
body of tongue	UBERON:0011876	88.99	gold quality
substantia nigra pars compacta	UBERON:0001965	88.05	gold quality
quadriceps femoris	UBERON:0001377	87.95	gold quality
pylorus	UBERON:0001166	87.93	gold quality
lateral globus pallidus	UBERON:0002476	87.73	gold quality
cardiac muscle of right atrium	UBERON:0003379	87.57	gold quality
biceps brachii	UBERON:0001507	87.49	gold quality
decidua	UBERON:0002450	87.04	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	86.91	gold quality
skeletal muscle tissue	UBERON:0001134	86.89	gold quality
cerebellar vermis	UBERON:0004720	86.73	gold quality
substantia nigra pars reticulata	UBERON:0001966	86.61	gold quality
trabecular bone tissue	UBERON:0002483	86.47	gold quality
subthalamic nucleus	UBERON:0001906	86.30	gold quality
cardia of stomach	UBERON:0001162	86.28	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.