LINC02359

Summary

LINC02359 (long intergenic non-protein coding RNA 2359, HGNC:53280) is a long non-coding RNA gene on chromosome 12q24.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53280
Approved symbol	LINC02359
Name	long intergenic non-protein coding RNA 2359
Location	12q24.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000284848
Ensembl biotype	lncRNA
Entrez	101927464
RNAcentral	URS00008B4745 — lncRNA, 640 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 58 — 58 lncRNA

ENST00000542804, ENST00000545642, ENST00000643016, ENST00000653111, ENST00000653935, ENST00000654535, ENST00000654753, ENST00000656545, ENST00000656734, ENST00000658727, ENST00000662894, ENST00000663226, ENST00000664730, ENST00000666372, ENST00000668523, ENST00000832421, ENST00000832422, ENST00000832423, ENST00000832424, ENST00000832425, ENST00000832426, ENST00000832427, ENST00000832428, ENST00000832429, ENST00000832430, ENST00000832431, ENST00000832432, ENST00000832433, ENST00000832434, ENST00000832435, ENST00000832436, ENST00000832437, ENST00000832438, ENST00000832439, ENST00000832440, ENST00000832441, ENST00000832442, ENST00000832443, ENST00000832444, ENST00000832445, ENST00000832446, ENST00000832447, ENST00000832448, ENST00000832449, ENST00000832450, ENST00000832451, ENST00000832452, ENST00000832453, ENST00000832454, ENST00000832455, ENST00000832456, ENST00000832457, ENST00000832458, ENST00000832459, ENST00000832460, ENST00000832461, ENST00000832462, ENST00000832463

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000542804 — 4 exons

Exon	Start	End
ENSE00002226157	126168235	126168531
ENSE00002231737	126169717	126169930
ENSE00002284718	126171316	126171365
ENSE00002318352	126171591	126171666

Expression profiles

Bgee: expression breadth broad, 94 present calls, max score 91.12.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0336 / max 40.5976, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
128678	0.0336	3

Top tissues by expression

94 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	91.12	gold quality
right testis	UBERON:0004534	90.30	gold quality
testis	UBERON:0000473	89.49	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.44	gold quality
sural nerve	UBERON:0015488	64.19	silver quality
cortical plate	UBERON:0005343	61.91	gold quality
superior frontal gyrus	UBERON:0002661	61.55	gold quality
prefrontal cortex	UBERON:0000451	59.69	gold quality
Brodmann (1909) area 9	UBERON:0013540	58.85	gold quality
frontal cortex	UBERON:0001870	58.19	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	57.94	gold quality
cerebral cortex	UBERON:0000956	56.42	gold quality
right frontal lobe	UBERON:0002810	56.41	gold quality
primary visual cortex	UBERON:0002436	54.62	gold quality
monocyte	CL:0000576	54.42	gold quality
bone marrow	UBERON:0002371	54.20	silver quality
endometrium	UBERON:0001295	53.86	silver quality
brain	UBERON:0000955	53.57	gold quality
multicellular organism	UBERON:0000468	53.05	gold quality
anterior cingulate cortex	UBERON:0009835	51.90	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	51.79	gold quality
blood	UBERON:0000178	51.18	gold quality
cerebellar cortex	UBERON:0002129	48.80	gold quality
cerebellar hemisphere	UBERON:0002245	48.76	gold quality
lymph node	UBERON:0000029	48.58	silver quality
calcaneal tendon	UBERON:0003701	48.54	silver quality
muscle of leg	UBERON:0001383	48.20	gold quality
placenta	UBERON:0001987	48.10	silver quality
right hemisphere of cerebellum	UBERON:0014890	48.05	gold quality
gastrocnemius	UBERON:0001388	47.66	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.72

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.