LINC02365

Summary

LINC02365 (long intergenic non-protein coding RNA 2365, HGNC:53285) is a long non-coding RNA gene on chromosome 4q35.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53285
Approved symbol	LINC02365
Name	long intergenic non-protein coding RNA 2365
Location	4q35.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	LVCAT8
Ensembl gene	ENSG00000254233
Ensembl biotype	lncRNA
Entrez	105377586
RNAcentral	URS00008E3A03 — lncRNA, 644 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 27 — 27 lncRNA

ENST00000519173, ENST00000520280, ENST00000522554, ENST00000765666, ENST00000765667, ENST00000765668, ENST00000765669, ENST00000765670, ENST00000765671, ENST00000765672, ENST00000765673, ENST00000765674, ENST00000765675, ENST00000765676, ENST00000765677, ENST00000765678, ENST00000765679, ENST00000765680, ENST00000765681, ENST00000765682, ENST00000765683, ENST00000765684, ENST00000765685, ENST00000765686, ENST00000765687, ENST00000765688, ENST00000765689

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000519173 — 2 exons

Exon	Start	End
ENSE00002101360	184624739	184624942
ENSE00002133006	184619046	184619314

Expression profiles

Bgee: expression breadth ubiquitous, 107 present calls, max score 82.12.

Top tissues by expression

107 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.12	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	73.39	gold quality
colonic epithelium	UBERON:0000397	66.33	silver quality
sural nerve	UBERON:0015488	65.84	silver quality
skeletal muscle tissue	UBERON:0001134	64.59	gold quality
placenta	UBERON:0001987	64.38	gold quality
cortical plate	UBERON:0005343	63.11	gold quality
lymph node	UBERON:0000029	60.29	gold quality
tonsil	UBERON:0002372	57.39	gold quality
islet of Langerhans	UBERON:0000006	57.09	gold quality
monocyte	CL:0000576	56.77	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.51	gold quality
bone marrow	UBERON:0002371	54.45	silver quality
blood	UBERON:0000178	53.56	gold quality
kidney	UBERON:0002113	53.06	gold quality
liver	UBERON:0002107	52.97	gold quality
vermiform appendix	UBERON:0001154	52.88	gold quality
prefrontal cortex	UBERON:0000451	52.43	gold quality
adult mammalian kidney	UBERON:0000082	52.41	gold quality
cortex of kidney	UBERON:0001225	51.82	gold quality
granulocyte	CL:0000094	51.16	silver quality
right lobe of liver	UBERON:0001114	50.95	gold quality
hindlimb stylopod muscle	UBERON:0004252	50.91	gold quality
spleen	UBERON:0002106	50.49	gold quality
muscle of leg	UBERON:0001383	50.05	gold quality
gastrocnemius	UBERON:0001388	49.63	gold quality
myometrium	UBERON:0001296	48.97	gold quality
ovary	UBERON:0000992	48.69	gold quality
superior frontal gyrus	UBERON:0002661	47.96	gold quality
metanephros cortex	UBERON:0010533	47.67	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.41

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.