LINC02366

Summary

LINC02366 (long intergenic non-protein coding RNA 2366, HGNC:53289) is a long non-coding RNA gene on chromosome 12p13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53289
Approved symbol	LINC02366
Name	long intergenic non-protein coding RNA 2366
Location	12p13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000256888
Ensembl biotype	lncRNA
Entrez	101928162
RNAcentral	URS0000759E5E — lncRNA, 771 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 21 — 21 lncRNA

ENST00000540188, ENST00000541949, ENST00000544815, ENST00000656544, ENST00000656609, ENST00000656813, ENST00000660451, ENST00000665090, ENST00000667977, ENST00000668788, ENST00000669563, ENST00000800225, ENST00000800226, ENST00000800227, ENST00000800228, ENST00000800229, ENST00000800230, ENST00000800231, ENST00000800232, ENST00000800233, ENST00000800234

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000540188 — 5 exons

Exon	Start	End
ENSE00002262907	10776512	10776801
ENSE00002280640	10769393	10769446
ENSE00002298987	10773952	10773984
ENSE00002321257	10777318	10777446
ENSE00004189504	10750171	10750300

Expression profiles

Bgee: expression breadth broad, 72 present calls, max score 95.34.

Top tissues by expression

193 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	95.34	gold quality
sperm	CL:0000019	92.34	gold quality
left testis	UBERON:0004533	74.50	gold quality
right testis	UBERON:0004534	73.15	gold quality
testis	UBERON:0000473	72.17	gold quality
monocyte	CL:0000576	63.34	gold quality
islet of Langerhans	UBERON:0000006	59.92	gold quality
pancreatic ductal cell	CL:0002079	55.57	silver quality
kidney epithelium	UBERON:0004819	55.34	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	54.20	gold quality
epithelial cell of pancreas	CL:0000083	54.11	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
endocervix	UBERON:0000458	52.86	gold quality
gastrocnemius	UBERON:0001388	52.57	gold quality
tibialis anterior	UBERON:0001385	50.40	silver quality
myocardium	UBERON:0002349	50.25	gold quality
descending thoracic aorta	UBERON:0002345	50.08	gold quality
deltoid	UBERON:0001476	49.98	gold quality
calcaneal tendon	UBERON:0003701	49.07	silver quality
ileal mucosa	UBERON:0000331	48.85	silver quality
cardiac atrium	UBERON:0002081	48.38	silver quality
muscle layer of sigmoid colon	UBERON:0035805	48.37	gold quality
tonsil	UBERON:0002372	47.78	silver quality
transverse colon	UBERON:0001157	47.40	gold quality
lower esophagus muscularis layer	UBERON:0035833	47.33	gold quality
tibial nerve	UBERON:0001323	47.21	gold quality
pancreas	UBERON:0001264	47.16	gold quality
nasal cavity epithelium	UBERON:0005384	47.03	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.93

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.