LINC02379

Summary

LINC02379 (long intergenic non-protein coding RNA 2379, HGNC:53302) is a long non-coding RNA gene on chromosome 4q28.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53302
Approved symbol	LINC02379
Name	long intergenic non-protein coding RNA 2379
Location	4q28.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251649
Ensembl biotype	lncRNA
Entrez	101927109
RNAcentral	URS00026A26B0 — lncRNA, 1724 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000505741, ENST00000655624, ENST00000657991, ENST00000658298, ENST00000667815, ENST00000670367

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000505741 — 2 exons

Exon	Start	End
ENSE00002059287	126071811	126072254
ENSE00003864134	126070706	126070813

Expression profiles

Bgee: expression breadth broad, 39 present calls, max score 82.48.

Top tissues by expression

49 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.48	silver quality
thymus	UBERON:0002370	73.60	silver quality
subcutaneous adipose tissue	UBERON:0002190	73.08	silver quality
left testis	UBERON:0004533	71.38	gold quality
testis	UBERON:0000473	71.06	gold quality
right testis	UBERON:0004534	70.98	gold quality
bone marrow	UBERON:0002371	70.04	silver quality
skeletal muscle tissue	UBERON:0001134	69.45	silver quality
quadriceps femoris	UBERON:0001377	69.42	gold quality
anterior cingulate cortex	UBERON:0009835	69.04	gold quality
spinal cord	UBERON:0002240	67.82	silver quality
cerebellar vermis	UBERON:0004720	67.75	gold quality
lung	UBERON:0002048	67.65	silver quality
kidney	UBERON:0002113	67.44	silver quality
multicellular organism	UBERON:0000468	62.71	gold quality
monocyte	CL:0000576	58.54	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	57.64	gold quality
blood	UBERON:0000178	52.97	gold quality
gastrocnemius	UBERON:0001388	49.81	gold quality
tibial nerve	UBERON:0001323	47.70	gold quality
heart left ventricle	UBERON:0002084	47.21	gold quality
right lobe of liver	UBERON:0001114	45.28	silver quality
putamen	UBERON:0001874	45.06	gold quality
prostate gland	UBERON:0002367	44.12	gold quality
heart	UBERON:0000948	42.99	silver quality
left adrenal gland	UBERON:0001234	42.84	silver quality
right atrium auricular region	UBERON:0006631	41.76	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	41.36	silver quality
tibial artery	UBERON:0007610	41.02	silver quality
omental fat pad	UBERON:0010414	40.66	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.