LINC02412

Summary

LINC02412 (long intergenic non-protein coding RNA 2412, HGNC:53341) is a long non-coding RNA gene on chromosome 12q22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53341
Approved symbol	LINC02412
Name	long intergenic non-protein coding RNA 2412
Location	12q22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258171
Ensembl biotype	lncRNA
Entrez	102724933
RNAcentral	URS000075AFBF — lncRNA, 1280 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 14 — 14 lncRNA

ENST00000552584, ENST00000653145, ENST00000655403, ENST00000665146, ENST00000665173, ENST00000755006, ENST00000755007, ENST00000755008, ENST00000755009, ENST00000755010, ENST00000755011, ENST00000755012, ENST00000755013, ENST00000755014

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000552584 — 3 exons

Exon	Start	End
ENSE00002375042	93175900	93176029
ENSE00002397579	93174341	93174976
ENSE00004103546	93181305	93182299

Expression profiles

Bgee: expression breadth ubiquitous, 107 present calls, max score 68.40.

Top tissues by expression

107 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	68.40	silver quality
skeletal muscle tissue	UBERON:0001134	65.84	gold quality
ganglionic eminence	UBERON:0004023	59.08	gold quality
tonsil	UBERON:0002372	57.04	silver quality
calcaneal tendon	UBERON:0003701	56.76	gold quality
heart left ventricle	UBERON:0002084	55.05	gold quality
bone marrow	UBERON:0002371	54.75	gold quality
urinary bladder	UBERON:0001255	53.11	gold quality
hindlimb stylopod muscle	UBERON:0004252	52.78	silver quality
heart	UBERON:0000948	52.56	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	52.30	gold quality
apex of heart	UBERON:0002098	52.11	gold quality
prefrontal cortex	UBERON:0000451	52.05	gold quality
muscle of leg	UBERON:0001383	51.71	gold quality
liver	UBERON:0002107	51.33	silver quality
placenta	UBERON:0001987	51.23	silver quality
blood	UBERON:0000178	51.15	gold quality
lymph node	UBERON:0000029	50.95	gold quality
left adrenal gland	UBERON:0001234	49.86	gold quality
adrenal gland	UBERON:0002369	49.66	gold quality
gastrocnemius	UBERON:0001388	49.62	gold quality
right lobe of liver	UBERON:0001114	49.44	silver quality
right adrenal gland cortex	UBERON:0035827	49.35	gold quality
left adrenal gland cortex	UBERON:0035825	48.86	gold quality
islet of Langerhans	UBERON:0000006	48.84	gold quality
right adrenal gland	UBERON:0001233	48.48	gold quality
frontal cortex	UBERON:0001870	48.25	gold quality
vermiform appendix	UBERON:0001154	48.06	gold quality
right atrium auricular region	UBERON:0006631	48.02	gold quality
superior frontal gyrus	UBERON:0002661	47.54	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.