LINC02430

Summary

LINC02430 (long intergenic non-protein coding RNA 2430, HGNC:53361) is a long non-coding RNA gene on chromosome 4q31.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53361
Approved symbol	LINC02430
Name	long intergenic non-protein coding RNA 2430
Location	4q31.23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250252
Ensembl biotype	lncRNA
Entrez	107986319
RNAcentral	URS0000EED698 — lncRNA, 948 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000504755, ENST00000668418

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000504755 — 4 exons

Exon	Start	End
ENSE00002065254	149149549	149149777
ENSE00002087010	149147799	149148045
ENSE00003863557	149153893	149154175
ENSE00003867303	149150225	149150402

Expression profiles

Bgee: expression breadth broad, 57 present calls, max score 79.11.

Top tissues by expression

57 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.11	gold quality
skin of abdomen	UBERON:0001416	56.36	gold quality
mucosa of transverse colon	UBERON:0004991	56.29	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.19	gold quality
blood	UBERON:0000178	55.12	gold quality
right lobe of liver	UBERON:0001114	53.68	gold quality
prefrontal cortex	UBERON:0000451	50.79	gold quality
transverse colon	UBERON:0001157	49.86	gold quality
colon	UBERON:0001155	49.37	gold quality
intestine	UBERON:0000160	49.30	gold quality
muscle of leg	UBERON:0001383	48.69	silver quality
cortex of kidney	UBERON:0001225	47.95	silver quality
kidney	UBERON:0002113	47.49	silver quality
muscle layer of sigmoid colon	UBERON:0035805	45.98	gold quality
right testis	UBERON:0004534	45.83	gold quality
islet of Langerhans	UBERON:0000006	45.81	gold quality
multicellular organism	UBERON:0000468	45.50	gold quality
heart	UBERON:0000948	45.36	silver quality
heart left ventricle	UBERON:0002084	45.35	gold quality
rectum	UBERON:0001052	45.28	gold quality
testis	UBERON:0000473	45.15	gold quality
adult mammalian kidney	UBERON:0000082	45.07	silver quality
skin of leg	UBERON:0001511	44.87	silver quality
left testis	UBERON:0004533	44.85	gold quality
cerebral cortex	UBERON:0000956	44.80	gold quality
gastrocnemius	UBERON:0001388	44.39	gold quality
tibial nerve	UBERON:0001323	44.32	gold quality
prostate gland	UBERON:0002367	44.19	silver quality
ascending aorta	UBERON:0001496	43.77	silver quality
putamen	UBERON:0001874	43.63	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.