LINC02431

Summary

LINC02431 (long intergenic non-protein coding RNA 2431, HGNC:53362) is a long non-coding RNA gene on chromosome 4q34.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53362
Approved symbol	LINC02431
Name	long intergenic non-protein coding RNA 2431
Location	4q34.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248872
Ensembl biotype	lncRNA
Entrez	100506122
RNAcentral	URS000075EEB8 — lncRNA, 1785 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000503929, ENST00000505329, ENST00000654933, ENST00000661044, ENST00000661066, ENST00000663587, ENST00000666580, ENST00000668913

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503929 — 3 exons

Exon	Start	End
ENSE00002020445	171055355	171055392
ENSE00002066556	171040608	171040834
ENSE00002076637	171055828	171059163

Expression profiles

Bgee: expression breadth broad, 24 present calls, max score 91.33.

Top tissues by expression

163 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	91.33	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.17	gold quality
superficial temporal artery	UBERON:0001614	64.58	gold quality
mucosa of paranasal sinus	UBERON:0005030	64.02	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	60.42	gold quality
left testis	UBERON:0004533	60.08	gold quality
epithelium of nasopharynx	UBERON:0001951	59.15	gold quality
right testis	UBERON:0004534	58.80	gold quality
testis	UBERON:0000473	58.74	gold quality
endothelial cell	CL:0000115	58.59	gold quality
buccal mucosa cell	CL:0002336	58.10	silver quality
gingival epithelium	UBERON:0001949	57.16	gold quality
germinal epithelium of ovary	UBERON:0001304	57.07	gold quality
monocyte	CL:0000576	53.37	gold quality
mammary duct	UBERON:0001765	53.12	gold quality
nasal cavity epithelium	UBERON:0005384	52.34	gold quality
gingiva	UBERON:0001828	52.30	gold quality
prefrontal cortex	UBERON:0000451	52.28	gold quality
amniotic fluid	UBERON:0000173	52.08	gold quality
lower lobe of lung	UBERON:0008949	51.46	silver quality
parietal pleura	UBERON:0002400	50.86	gold quality
visceral pleura	UBERON:0002401	50.46	gold quality
corpus epididymis	UBERON:0004359	49.74	gold quality
cauda epididymis	UBERON:0004360	49.62	gold quality
caput epididymis	UBERON:0004358	49.29	gold quality
gastrocnemius	UBERON:0001388	48.92	gold quality
tonsil	UBERON:0002372	47.64	gold quality
vastus lateralis	UBERON:0001379	47.48	gold quality
quadriceps femoris	UBERON:0001377	47.31	gold quality
mouth mucosa	UBERON:0003729	46.94	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.44

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.