LINC02435

Summary

LINC02435 (long intergenic non-protein coding RNA 2435, HGNC:53366) is a long non-coding RNA gene on chromosome 4q28.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53366
Approved symbol	LINC02435
Name	long intergenic non-protein coding RNA 2435
Location	4q28.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251526
Ensembl biotype	lncRNA
Entrez	107986311
RNAcentral	URS0000EEEAD7 — lncRNA, 1766 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000503950, ENST00000508291, ENST00000664210, ENST00000667633

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503950 — 5 exons

Exon	Start	End
ENSE00002052589	123496741	123496944
ENSE00002069158	123522017	123522113
ENSE00002084676	123490268	123490512
ENSE00004034884	123526363	123526501
ENSE00004034885	123527184	123527582

Expression profiles

Bgee: expression breadth broad, 97 present calls, max score 88.01.

Top tissues by expression

97 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.01	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.49	gold quality
sural nerve	UBERON:0015488	64.36	gold quality
fundus of stomach	UBERON:0001160	62.93	gold quality
right lobe of liver	UBERON:0001114	59.72	gold quality
liver	UBERON:0002107	59.34	gold quality
placenta	UBERON:0001987	59.11	gold quality
lymph node	UBERON:0000029	57.33	gold quality
body of stomach	UBERON:0001161	57.33	gold quality
body of pancreas	UBERON:0001150	57.27	gold quality
pancreas	UBERON:0001264	57.20	gold quality
stomach	UBERON:0000945	57.14	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.04	gold quality
islet of Langerhans	UBERON:0000006	55.84	gold quality
gall bladder	UBERON:0002110	55.77	gold quality
duodenum	UBERON:0002114	55.64	gold quality
right uterine tube	UBERON:0001302	55.21	gold quality
fallopian tube	UBERON:0003889	53.79	gold quality
endometrium	UBERON:0001295	52.59	gold quality
calcaneal tendon	UBERON:0003701	51.89	silver quality
monocyte	CL:0000576	51.22	silver quality
rectum	UBERON:0001052	50.51	gold quality
blood	UBERON:0000178	49.50	silver quality
muscle of leg	UBERON:0001383	49.48	gold quality
gastrocnemius	UBERON:0001388	48.29	gold quality
prefrontal cortex	UBERON:0000451	47.98	gold quality
right lung	UBERON:0002167	46.88	gold quality
left uterine tube	UBERON:0001303	46.63	gold quality
mucosa of transverse colon	UBERON:0004991	46.37	gold quality
lung	UBERON:0002048	46.20	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.93

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.