LINC02437

Summary

LINC02437 (long intergenic non-protein coding RNA 2437, HGNC:53369) is a long non-coding RNA gene on chromosome 4q35.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53369
Approved symbol	LINC02437
Name	long intergenic non-protein coding RNA 2437
Location	4q35.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248517
Ensembl biotype	lncRNA
Entrez	107986333
RNAcentral	URS000045817D — lncRNA, 911 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000505053

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000505053 — 2 exons

Exon	Start	End
ENSE00002024490	185004500	185005186
ENSE00002041220	184988997	184989220

Expression profiles

Bgee: expression breadth broad, 60 present calls, max score 76.14.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0109 / max 6.7852, expressed in 6 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
50869	0.0109	6

Top tissues by expression

60 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skin of leg	UBERON:0001511	76.14	gold quality
zone of skin	UBERON:0000014	75.55	gold quality
skin of abdomen	UBERON:0001416	74.80	gold quality
adult mammalian kidney	UBERON:0000082	69.76	gold quality
kidney	UBERON:0002113	69.33	gold quality
cortex of kidney	UBERON:0001225	67.59	gold quality
metanephros cortex	UBERON:0010533	65.75	gold quality
ectocervix	UBERON:0012249	61.50	gold quality
multicellular organism	UBERON:0000468	58.23	gold quality
monocyte	CL:0000576	55.04	gold quality
endometrium	UBERON:0001295	54.17	gold quality
vagina	UBERON:0000996	53.17	gold quality
liver	UBERON:0002107	52.15	gold quality
small intestine Peyer’s patch	UBERON:0003454	52.13	gold quality
muscle of leg	UBERON:0001383	51.74	gold quality
gastrocnemius	UBERON:0001388	51.69	gold quality
right lobe of liver	UBERON:0001114	50.87	gold quality
tonsil	UBERON:0002372	49.99	silver quality
left ovary	UBERON:0002119	49.81	gold quality
blood	UBERON:0000178	49.10	silver quality
ovary	UBERON:0000992	48.09	gold quality
tibial nerve	UBERON:0001323	47.70	gold quality
thoracic mammary gland	UBERON:0005200	47.55	gold quality
prostate gland	UBERON:0002367	47.44	gold quality
prefrontal cortex	UBERON:0000451	47.32	silver quality
intestine	UBERON:0000160	47.01	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	46.95	gold quality
omental fat pad	UBERON:0010414	46.68	gold quality
adipose tissue	UBERON:0001013	46.48	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	46.12	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.