LINC02462

Summary

LINC02462 (long intergenic non-protein coding RNA 2462, HGNC:53399) is a long non-coding RNA gene on chromosome 4q28.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53399
Approved symbol	LINC02462
Name	long intergenic non-protein coding RNA 2462
Location	4q28.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251291
Ensembl biotype	lncRNA
Entrez	105377434
RNAcentral	URS0000BC4474 — lncRNA, 648 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000503009, ENST00000666281, ENST00000666371, ENST00000670860, ENST00000815700, ENST00000815701, ENST00000815702

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503009 — 3 exons

Exon	Start	End
ENSE00002076345	134455294	134455524
ENSE00002083183	134423867	134423956
ENSE00002087774	134457744	134457852

Expression profiles

Bgee: expression breadth broad, 47 present calls, max score 81.54.

Top tissues by expression

47 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.54	gold quality
liver	UBERON:0002107	65.61	silver quality
stromal cell of endometrium	CL:0002255	63.60	gold quality
islet of Langerhans	UBERON:0000006	59.12	gold quality
prefrontal cortex	UBERON:0000451	55.32	gold quality
rectum	UBERON:0001052	54.16	gold quality
blood	UBERON:0000178	51.92	silver quality
monocyte	CL:0000576	51.91	gold quality
endometrium	UBERON:0001295	51.74	gold quality
heart left ventricle	UBERON:0002084	51.06	gold quality
adult mammalian kidney	UBERON:0000082	49.93	gold quality
testis	UBERON:0000473	49.33	gold quality
left testis	UBERON:0004533	49.16	gold quality
muscle layer of sigmoid colon	UBERON:0035805	48.66	gold quality
multicellular organism	UBERON:0000468	46.80	gold quality
right frontal lobe	UBERON:0002810	46.63	gold quality
body of uterus	UBERON:0009853	46.59	gold quality
spleen	UBERON:0002106	46.42	gold quality
lung	UBERON:0002048	46.19	gold quality
right testis	UBERON:0004534	45.90	gold quality
transverse colon	UBERON:0001157	45.19	gold quality
nucleus accumbens	UBERON:0001882	44.84	gold quality
gastrocnemius	UBERON:0001388	44.33	gold quality
omental fat pad	UBERON:0010414	43.93	gold quality
lower esophagus muscularis layer	UBERON:0035833	43.38	gold quality
body of stomach	UBERON:0001161	43.24	silver quality
fallopian tube	UBERON:0003889	42.92	gold quality
tibial artery	UBERON:0007610	42.81	silver quality
putamen	UBERON:0001874	42.57	gold quality
thoracic mammary gland	UBERON:0005200	42.26	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.