LINC02479

Summary

LINC02479 (long intergenic non-protein coding RNA 2479, HGNC:53453) is a long non-coding RNA gene on chromosome 4q28.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53453
Approved symbol	LINC02479
Name	long intergenic non-protein coding RNA 2479
Location	4q28.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251326
Ensembl biotype	lncRNA
Entrez	105377420
RNAcentral	URS0000EF2E50 — lncRNA, 941 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000508942, ENST00000655259

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000508942 — 2 exons

Exon	Start	End
ENSE00002059150	130376229	130376559
ENSE00002074890	130386073	130386371

Expression profiles

Bgee: expression breadth broad, 94 present calls, max score 85.56.

Top tissues by expression

94 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.56	silver quality
sural nerve	UBERON:0015488	67.52	silver quality
cortical plate	UBERON:0005343	64.64	gold quality
urinary bladder	UBERON:0001255	61.36	gold quality
right lobe of thyroid gland	UBERON:0001119	58.73	gold quality
lymph node	UBERON:0000029	55.80	gold quality
bone marrow	UBERON:0002371	54.40	gold quality
cortex of kidney	UBERON:0001225	53.25	silver quality
stromal cell of endometrium	CL:0002255	52.81	silver quality
placenta	UBERON:0001987	52.78	gold quality
right lobe of liver	UBERON:0001114	52.71	gold quality
monocyte	CL:0000576	52.64	gold quality
blood	UBERON:0000178	52.63	gold quality
islet of Langerhans	UBERON:0000006	52.17	gold quality
endometrium	UBERON:0001295	51.63	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.24	gold quality
calcaneal tendon	UBERON:0003701	49.90	silver quality
prefrontal cortex	UBERON:0000451	49.57	gold quality
tonsil	UBERON:0002372	49.12	gold quality
liver	UBERON:0002107	48.66	silver quality
primary visual cortex	UBERON:0002436	46.83	silver quality
body of pancreas	UBERON:0001150	46.76	silver quality
cerebellum	UBERON:0002037	46.58	silver quality
gastrocnemius	UBERON:0001388	46.40	silver quality
cerebellar hemisphere	UBERON:0002245	46.36	silver quality
adrenal tissue	UBERON:0018303	45.98	silver quality
right hemisphere of cerebellum	UBERON:0014890	45.36	silver quality
heart left ventricle	UBERON:0002084	45.29	gold quality
kidney	UBERON:0002113	44.99	silver quality
endocervix	UBERON:0000458	44.51	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.