LINC02482

Summary

LINC02482 (long intergenic non-protein coding RNA 2482, HGNC:53458) is a long non-coding RNA gene on chromosome 4p16.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53458
Approved symbol	LINC02482
Name	long intergenic non-protein coding RNA 2482
Location	4p16.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251580
Ensembl biotype	lncRNA
Entrez	105374366
RNAcentral	URS0000A76DFD — lncRNA, 484 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000513179, ENST00000515205, ENST00000647523, ENST00000654965, ENST00000656634, ENST00000662111, ENST00000667300, ENST00000777166, ENST00000777167, ENST00000777168, ENST00000777169, ENST00000777170, ENST00000777171

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000513179 — 2 exons

Exon	Start	End
ENSE00002029326	6670728	6670993
ENSE00002078690	6673684	6673823

Expression profiles

Bgee: expression breadth ubiquitous, 199 present calls, max score 85.61.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 6.7243 / max 87.8376, expressed in 1650 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
51266	5.4200	1584
51265	1.3043	788

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
pituitary gland	UBERON:0000007	85.61	gold quality
adenohypophysis	UBERON:0002196	85.41	gold quality
apex of heart	UBERON:0002098	83.73	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.41	gold quality
ileal mucosa	UBERON:0000331	82.55	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	82.54	gold quality
right uterine tube	UBERON:0001302	82.49	gold quality
amygdala	UBERON:0001876	81.90	gold quality
nucleus accumbens	UBERON:0001882	81.80	gold quality
anterior cingulate cortex	UBERON:0009835	81.69	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.36	gold quality
putamen	UBERON:0001874	81.28	gold quality
tibialis anterior	UBERON:0001385	80.91	silver quality
left adrenal gland cortex	UBERON:0035825	80.63	gold quality
hypothalamus	UBERON:0001898	80.61	gold quality
hindlimb stylopod muscle	UBERON:0004252	80.61	gold quality
caudate nucleus	UBERON:0001873	80.59	gold quality
left testis	UBERON:0004533	80.30	gold quality
right adrenal gland cortex	UBERON:0035827	79.91	gold quality
right testis	UBERON:0004534	79.90	gold quality
islet of Langerhans	UBERON:0000006	79.84	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	79.58	gold quality
adrenal cortex	UBERON:0001235	79.45	gold quality
left adrenal gland	UBERON:0001234	79.33	gold quality
right adrenal gland	UBERON:0001233	79.17	gold quality
testis	UBERON:0000473	79.11	gold quality
Brodmann (1909) area 9	UBERON:0013540	78.97	gold quality
gastrocnemius	UBERON:0001388	78.96	gold quality
muscle of leg	UBERON:0001383	78.95	gold quality
right atrium auricular region	UBERON:0006631	78.81	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.25

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.