LINC02493

Summary

LINC02493 (long intergenic non-protein coding RNA 2493, HGNC:53477) is a long non-coding RNA gene on chromosome 4p15.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53477
Approved symbol	LINC02493
Name	long intergenic non-protein coding RNA 2493
Location	4p15.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250819
Ensembl biotype	lncRNA
Entrez	101929123
RNAcentral	URS00007E3DCB — lncRNA, 1702 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000509964, ENST00000659226

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000509964 — 6 exons

Exon	Start	End
ENSE00002024701	17172133	17172268
ENSE00002053832	17174916	17175088
ENSE00002067842	17171757	17171803
ENSE00002075823	17175492	17176585
ENSE00002081543	17181852	17181896
ENSE00002082880	17185851	17186059

Expression profiles

Bgee: expression breadth broad, 27 present calls, max score 63.41.

Top tissues by expression

167 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
endothelial cell	CL:0000115	63.41	gold quality
buccal mucosa cell	CL:0002336	57.96	gold quality
upper leg skin	UBERON:0004262	55.83	gold quality
cortical plate	UBERON:0005343	55.54	silver quality
skin of hip	UBERON:0001554	51.90	gold quality
tibial artery	UBERON:0007610	49.19	gold quality
islet of Langerhans	UBERON:0000006	46.13	gold quality
gall bladder	UBERON:0002110	45.71	silver quality
smooth muscle tissue	UBERON:0001135	45.66	silver quality
aorta	UBERON:0000947	44.60	silver quality
prefrontal cortex	UBERON:0000451	44.22	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
body of pancreas	UBERON:0001150	42.95	silver quality
endometrium	UBERON:0001295	42.85	gold quality
pancreas	UBERON:0001264	42.62	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
skin of abdomen	UBERON:0001416	42.56	silver quality
muscle of leg	UBERON:0001383	42.39	silver quality
body of stomach	UBERON:0001161	42.25	gold quality
left adrenal gland cortex	UBERON:0035825	42.21	silver quality
uterus	UBERON:0000995	42.04	gold quality
stomach	UBERON:0000945	41.74	gold quality
thyroid gland	UBERON:0002046	41.70	gold quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
ventral tegmental area	UBERON:0002691	41.26	gold quality
trigeminal ganglion	UBERON:0001675	41.19	gold quality
bone marrow	UBERON:0002371	41.14	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.