LINC02497

Summary

LINC02497 (long intergenic non-protein coding RNA 2497, HGNC:53482) is a long non-coding RNA gene on chromosome 4p15.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53482
Approved symbol	LINC02497
Name	long intergenic non-protein coding RNA 2497
Location	4p15.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251182
Ensembl biotype	lncRNA
Entrez	102723778
RNAcentral	URS000037A92F — lncRNA, 507 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000515292, ENST00000660077, ENST00000818235

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000515292 — 5 exons

Exon	Start	End
ENSE00002033013	31176621	31176706
ENSE00002062296	31211551	31211678
ENSE00002076207	31194449	31194480
ENSE00002079100	31196354	31196461
ENSE00002083342	31171013	31171299

Expression profiles

Bgee: expression breadth broad, 69 present calls, max score 73.31.

Top tissues by expression

69 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	73.31	gold quality
ganglionic eminence	UBERON:0004023	65.64	gold quality
cortex of kidney	UBERON:0001225	54.14	gold quality
monocyte	CL:0000576	50.07	silver quality
blood	UBERON:0000178	49.88	silver quality
prefrontal cortex	UBERON:0000451	49.64	gold quality
islet of Langerhans	UBERON:0000006	49.13	gold quality
primary visual cortex	UBERON:0002436	47.00	silver quality
superior frontal gyrus	UBERON:0002661	46.86	silver quality
skin of abdomen	UBERON:0001416	46.35	gold quality
lung	UBERON:0002048	45.78	gold quality
body of pancreas	UBERON:0001150	44.82	gold quality
tibial artery	UBERON:0007610	44.74	gold quality
ascending aorta	UBERON:0001496	44.37	gold quality
substantia nigra	UBERON:0002038	44.08	gold quality
thoracic aorta	UBERON:0001515	44.03	silver quality
esophagus mucosa	UBERON:0002469	43.75	silver quality
right atrium auricular region	UBERON:0006631	43.69	silver quality
Brodmann (1909) area 9	UBERON:0013540	43.54	silver quality
left coronary artery	UBERON:0001626	42.82	silver quality
amygdala	UBERON:0001876	42.76	gold quality
heart	UBERON:0000948	42.74	silver quality
myometrium	UBERON:0001296	42.74	silver quality
left adrenal gland cortex	UBERON:0035825	42.74	silver quality
muscle layer of sigmoid colon	UBERON:0035805	42.49	silver quality
zone of skin	UBERON:0000014	42.45	gold quality
nucleus accumbens	UBERON:0001882	42.36	gold quality
gastrocnemius	UBERON:0001388	42.23	silver quality
heart left ventricle	UBERON:0002084	42.03	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	41.99	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.