LINC02507

Summary

LINC02507 (long intergenic non-protein coding RNA 2507, HGNC:53496) is a long non-coding RNA gene on chromosome 4q31.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53496
Approved symbol	LINC02507
Name	long intergenic non-protein coding RNA 2507
Location	4q31.23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251688
Ensembl biotype	lncRNA
Entrez	105377477
RNAcentral	URS00026A1E4E — lncRNA, 1165 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000509370, ENST00000652998, ENST00000653754, ENST00000656017, ENST00000729013

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000509370 — 7 exons

Exon	Start	End
ENSE00002030350	147567606	147567708
ENSE00002032061	147573216	147573306
ENSE00002036814	147572681	147572800
ENSE00002049794	147594265	147594587
ENSE00002061260	147570788	147570930
ENSE00002078384	147578731	147578855
ENSE00002501868	147575443	147575565

Expression profiles

Bgee: expression breadth broad, 87 present calls, max score 63.04.

Top tissues by expression

87 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right testis	UBERON:0004534	63.04	gold quality
left testis	UBERON:0004533	63.01	gold quality
testis	UBERON:0000473	62.45	gold quality
liver	UBERON:0002107	60.39	gold quality
ganglionic eminence	UBERON:0004023	59.45	gold quality
ectocervix	UBERON:0012249	56.46	gold quality
hindlimb stylopod muscle	UBERON:0004252	52.69	gold quality
calcaneal tendon	UBERON:0003701	52.08	silver quality
smooth muscle tissue	UBERON:0001135	51.56	gold quality
prefrontal cortex	UBERON:0000451	51.45	gold quality
fundus of stomach	UBERON:0001160	50.06	gold quality
blood	UBERON:0000178	50.02	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	49.93	gold quality
myometrium	UBERON:0001296	49.40	gold quality
placenta	UBERON:0001987	48.92	gold quality
monocyte	CL:0000576	48.85	silver quality
vagina	UBERON:0000996	48.51	gold quality
muscle of leg	UBERON:0001383	48.03	gold quality
endometrium	UBERON:0001295	47.60	silver quality
islet of Langerhans	UBERON:0000006	47.46	silver quality
adenohypophysis	UBERON:0002196	47.26	gold quality
right ovary	UBERON:0002118	46.96	gold quality
tibial artery	UBERON:0007610	46.81	gold quality
vermiform appendix	UBERON:0001154	46.57	silver quality
gastrocnemius	UBERON:0001388	46.36	gold quality
gall bladder	UBERON:0002110	46.04	gold quality
adult mammalian kidney	UBERON:0000082	45.62	silver quality
left coronary artery	UBERON:0001626	45.41	gold quality
right coronary artery	UBERON:0001625	45.26	gold quality
putamen	UBERON:0001874	45.01	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.11

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.