LINC02513

Summary

LINC02513 (long intergenic non-protein coding RNA 2513, HGNC:53502) is a long non-coding RNA gene on chromosome 4p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53502
Approved symbol	LINC02513
Name	long intergenic non-protein coding RNA 2513
Location	4p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248227
Ensembl biotype	lncRNA
Entrez	105374410
RNAcentral	URS000016998F — lncRNA, 500 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000503465, ENST00000757609, ENST00000757610, ENST00000757611, ENST00000757612, ENST00000757613, ENST00000757614, ENST00000757615, ENST00000757616

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503465 — 4 exons

Exon	Start	End
ENSE00004108879	38287812	38287931
ENSE00004108884	38366871	38367030
ENSE00004108891	38385377	38385962
ENSE00004108894	38288033	38288146

Expression profiles

Bgee: expression breadth broad, 87 present calls, max score 72.91.

Top tissues by expression

87 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ventricular zone	UBERON:0003053	72.91	gold quality
ganglionic eminence	UBERON:0004023	68.11	gold quality
hindlimb stylopod muscle	UBERON:0004252	66.42	gold quality
lymph node	UBERON:0000029	66.08	gold quality
vermiform appendix	UBERON:0001154	64.04	gold quality
urinary bladder	UBERON:0001255	59.95	gold quality
prefrontal cortex	UBERON:0000451	59.90	gold quality
smooth muscle tissue	UBERON:0001135	59.38	gold quality
monocyte	CL:0000576	57.88	gold quality
superior frontal gyrus	UBERON:0002661	57.28	gold quality
placenta	UBERON:0001987	55.67	gold quality
gall bladder	UBERON:0002110	55.24	gold quality
islet of Langerhans	UBERON:0000006	54.89	gold quality
frontal cortex	UBERON:0001870	54.22	gold quality
endometrium	UBERON:0001295	54.02	gold quality
right hemisphere of cerebellum	UBERON:0014890	53.77	gold quality
blood	UBERON:0000178	53.34	gold quality
anterior cingulate cortex	UBERON:0009835	52.79	gold quality
cerebral cortex	UBERON:0000956	52.71	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	52.63	gold quality
nucleus accumbens	UBERON:0001882	52.31	gold quality
brain	UBERON:0000955	51.76	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	51.68	gold quality
putamen	UBERON:0001874	51.21	gold quality
Brodmann (1909) area 9	UBERON:0013540	51.07	gold quality
gastrocnemius	UBERON:0001388	50.95	gold quality
liver	UBERON:0002107	50.77	gold quality
primary visual cortex	UBERON:0002436	50.55	gold quality
substantia nigra	UBERON:0002038	50.31	gold quality
right coronary artery	UBERON:0001625	50.25	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.