LINC02515

Summary

LINC02515 (long intergenic non-protein coding RNA 2515, HGNC:53504) is a long non-coding RNA gene on chromosome 4q35.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53504
Approved symbol	LINC02515
Name	long intergenic non-protein coding RNA 2515
Location	4q35.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250620
Ensembl biotype	lncRNA
Entrez	102723920
RNAcentral	URS00026A277B — lncRNA, 2567 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000503677, ENST00000796049, ENST00000796050

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503677 — 3 exons

Exon	Start	End
ENSE00002061913	187413562	187413711
ENSE00004181285	187415310	187415755
ENSE00004181287	187408232	187408899

Expression profiles

Bgee: expression breadth broad, 74 present calls, max score 76.40.

Top tissues by expression

74 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.40	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	62.71	silver quality
myometrium	UBERON:0001296	60.17	gold quality
sural nerve	UBERON:0015488	58.15	silver quality
monocyte	CL:0000576	54.10	gold quality
calcaneal tendon	UBERON:0003701	53.47	silver quality
thoracic mammary gland	UBERON:0005200	53.10	gold quality
tibial artery	UBERON:0007610	52.89	gold quality
popliteal artery	UBERON:0002250	52.86	gold quality
lymph node	UBERON:0000029	52.47	gold quality
skeletal muscle tissue	UBERON:0001134	52.01	silver quality
hindlimb stylopod muscle	UBERON:0004252	51.76	gold quality
smooth muscle tissue	UBERON:0001135	51.72	gold quality
subcutaneous adipose tissue	UBERON:0002190	51.46	gold quality
testis	UBERON:0000473	50.33	gold quality
prefrontal cortex	UBERON:0000451	50.20	gold quality
descending thoracic aorta	UBERON:0002345	49.90	gold quality
blood	UBERON:0000178	49.86	silver quality
adipose tissue	UBERON:0001013	49.32	gold quality
lung	UBERON:0002048	47.47	silver quality
muscle of leg	UBERON:0001383	46.91	silver quality
multicellular organism	UBERON:0000468	46.33	gold quality
thoracic aorta	UBERON:0001515	45.52	gold quality
islet of Langerhans	UBERON:0000006	45.48	gold quality
body of pancreas	UBERON:0001150	45.30	silver quality
ascending aorta	UBERON:0001496	45.26	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	44.88	silver quality
omental fat pad	UBERON:0010414	44.81	gold quality
gastrocnemius	UBERON:0001388	44.72	silver quality
urinary bladder	UBERON:0001255	44.31	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.99

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.