LINC02519

Summary

LINC02519 (long intergenic non-protein coding RNA 2519, HGNC:53510) is a long non-coding RNA gene on chromosome 6q27.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53510
Approved symbol	LINC02519
Name	long intergenic non-protein coding RNA 2519
Location	6q27
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226194
Ensembl biotype	lncRNA
Entrez	105378147
RNAcentral	URS00026A23E0 — lncRNA, 1030 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000433388, ENST00000440168, ENST00000809422

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000433388 — 2 exons

Exon	Start	End
ENSE00004205164	169388201	169388407
ENSE00004205165	169369574	169370400

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 89.29.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0114 / max 5.1373, expressed in 5 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
76786	0.0114	5

Top tissues by expression

120 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.29	gold quality
right lung	UBERON:0002167	80.12	gold quality
left ovary	UBERON:0002119	76.75	gold quality
ovary	UBERON:0000992	75.78	gold quality
right ovary	UBERON:0002118	73.31	gold quality
endocervix	UBERON:0000458	72.92	gold quality
uterine cervix	UBERON:0000002	71.13	gold quality
mucosa of stomach	UBERON:0001199	69.98	gold quality
ectocervix	UBERON:0012249	69.78	gold quality
right uterine tube	UBERON:0001302	69.48	gold quality
right coronary artery	UBERON:0001625	68.83	gold quality
fallopian tube	UBERON:0003889	68.07	gold quality
left uterine tube	UBERON:0001303	67.40	gold quality
body of uterus	UBERON:0009853	66.78	gold quality
upper lobe of left lung	UBERON:0008952	66.51	gold quality
lung	UBERON:0002048	65.37	gold quality
myometrium	UBERON:0001296	64.92	gold quality
gall bladder	UBERON:0002110	64.90	gold quality
stromal cell of endometrium	CL:0002255	64.49	gold quality
urinary bladder	UBERON:0001255	63.51	gold quality
vagina	UBERON:0000996	62.40	gold quality
ascending aorta	UBERON:0001496	62.40	gold quality
thoracic aorta	UBERON:0001515	62.31	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	61.91	gold quality
cortical plate	UBERON:0005343	61.60	gold quality
tibial nerve	UBERON:0001323	61.51	gold quality
right adrenal gland	UBERON:0001233	61.50	gold quality
prostate gland	UBERON:0002367	61.31	gold quality
thoracic mammary gland	UBERON:0005200	61.11	gold quality
left coronary artery	UBERON:0001626	61.08	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.