LINC02522

Summary

LINC02522 (long intergenic non-protein coding RNA 2522, HGNC:53541) is a long non-coding RNA gene on chromosome 6p24.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53541
Approved symbol	LINC02522
Name	long intergenic non-protein coding RNA 2522
Location	6p24.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231056
Ensembl biotype	lncRNA
Entrez	101928106
RNAcentral	URS00026A1A5D — lncRNA, 3278 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000741651, ENST00000741654, ENST00000741655, ENST00000741656, ENST00000741657, ENST00000741658, ENST00000741659

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000741651 — 4 exons

Exon	Start	End
ENSE00001657882	10474500	10474593
ENSE00004079060	10458176	10458536
ENSE00004079062	10478341	10478541
ENSE00004079064	10481566	10481976

Expression profiles

Bgee: expression breadth broad, 56 present calls, max score 97.42.

Top tissues by expression

56 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	97.42	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.94	gold quality
right ovary	UBERON:0002118	68.52	gold quality
monocyte	CL:0000576	66.19	gold quality
blood	UBERON:0000178	65.90	gold quality
duodenum	UBERON:0002114	63.78	gold quality
placenta	UBERON:0001987	60.30	gold quality
fundus of stomach	UBERON:0001160	60.24	gold quality
body of pancreas	UBERON:0001150	59.91	gold quality
skin of abdomen	UBERON:0001416	58.61	gold quality
gastrocnemius	UBERON:0001388	57.96	gold quality
stomach	UBERON:0000945	57.50	gold quality
body of stomach	UBERON:0001161	57.50	gold quality
thoracic mammary gland	UBERON:0005200	57.16	gold quality
testis	UBERON:0000473	56.86	gold quality
right testis	UBERON:0004534	56.58	gold quality
muscle layer of sigmoid colon	UBERON:0035805	56.13	gold quality
prostate gland	UBERON:0002367	56.03	gold quality
left ovary	UBERON:0002119	55.54	gold quality
endometrium	UBERON:0001295	55.44	gold quality
multicellular organism	UBERON:0000468	55.17	gold quality
left testis	UBERON:0004533	54.57	gold quality
tibial artery	UBERON:0007610	53.36	gold quality
esophagus mucosa	UBERON:0002469	53.22	gold quality
subcutaneous adipose tissue	UBERON:0002190	52.86	gold quality
ectocervix	UBERON:0012249	52.72	gold quality
cerebellar hemisphere	UBERON:0002245	52.19	gold quality
Brodmann (1909) area 9	UBERON:0013540	51.64	gold quality
omental fat pad	UBERON:0010414	51.49	gold quality
rectum	UBERON:0001052	51.35	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.