LINC02523

Summary

LINC02523 (long intergenic non-protein coding RNA 2523, HGNC:53542) is a long non-coding RNA gene on chromosome 6q22.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53542
Approved symbol	LINC02523
Name	long intergenic non-protein coding RNA 2523
Location	6q22.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224506
Ensembl biotype	lncRNA
Entrez	643623
RNAcentral	URS000075A5FE — lncRNA, 2979 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000423208, ENST00000670227, ENST00000834506, ENST00000834507, ENST00000834508, ENST00000834509, ENST00000834510, ENST00000834511, ENST00000834512, ENST00000834513, ENST00000834514

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423208 — 4 exons

Exon	Start	End
ENSE00001608620	125674353	125674475
ENSE00001726329	125717458	125720218
ENSE00001743711	125683642	125683679
ENSE00001778308	125682377	125682417

Expression profiles

Bgee: expression breadth broad, 53 present calls, max score 65.54.

Top tissues by expression

53 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skeletal muscle tissue	UBERON:0001134	65.54	silver quality
skin of abdomen	UBERON:0001416	53.05	gold quality
endometrium	UBERON:0001295	52.27	silver quality
urinary bladder	UBERON:0001255	52.25	silver quality
corpus callosum	UBERON:0002336	50.54	silver quality
tibial artery	UBERON:0007610	50.48	gold quality
popliteal artery	UBERON:0002250	50.46	gold quality
blood	UBERON:0000178	50.44	silver quality
liver	UBERON:0002107	49.72	silver quality
right ovary	UBERON:0002118	49.14	gold quality
pancreas	UBERON:0001264	48.02	gold quality
prefrontal cortex	UBERON:0000451	47.61	silver quality
multicellular organism	UBERON:0000468	46.66	gold quality
muscle of leg	UBERON:0001383	46.66	silver quality
saliva-secreting gland	UBERON:0001044	46.45	silver quality
skin of leg	UBERON:0001511	46.33	gold quality
gastrocnemius	UBERON:0001388	46.31	silver quality
smooth muscle tissue	UBERON:0001135	46.27	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	46.22	silver quality
heart	UBERON:0000948	44.81	gold quality
heart left ventricle	UBERON:0002084	44.52	silver quality
left coronary artery	UBERON:0001626	44.26	gold quality
Ammon’s horn	UBERON:0001954	44.16	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	42.53	gold quality
brain	UBERON:0000955	42.33	silver quality
prostate gland	UBERON:0002367	41.86	gold quality
right adrenal gland cortex	UBERON:0035827	41.83	silver quality
fallopian tube	UBERON:0003889	41.32	silver quality
hypothalamus	UBERON:0001898	41.05	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	40.85	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.