LINC02524

Summary

LINC02524 (long intergenic non-protein coding RNA 2524, HGNC:53544) is a long non-coding RNA gene on chromosome 6q23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53544
Approved symbol	LINC02524
Name	long intergenic non-protein coding RNA 2524
Location	6q23.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233534
Ensembl biotype	lncRNA
Entrez	105378013
RNAcentral	URS00026A25FE — lncRNA, 941 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000416481, ENST00000648709, ENST00000655506

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000416481 — 2 exons

Exon	Start	End
ENSE00001623073	135629405	135629623
ENSE00001692825	135629957	135630268

Expression profiles

Bgee: expression breadth broad, 55 present calls, max score 95.47.

Top tissues by expression

55 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	95.47	gold quality
monocyte	CL:0000576	67.03	gold quality
liver	UBERON:0002107	61.67	gold quality
adult mammalian kidney	UBERON:0000082	58.95	gold quality
kidney	UBERON:0002113	57.09	gold quality
blood	UBERON:0000178	55.50	gold quality
cortex of kidney	UBERON:0001225	54.42	gold quality
lymph node	UBERON:0000029	54.41	gold quality
islet of Langerhans	UBERON:0000006	53.74	gold quality
metanephros cortex	UBERON:0010533	50.15	gold quality
corpus callosum	UBERON:0002336	49.64	silver quality
calcaneal tendon	UBERON:0003701	47.78	silver quality
adrenal tissue	UBERON:0018303	47.53	gold quality
adrenal gland	UBERON:0002369	47.39	gold quality
thoracic aorta	UBERON:0001515	45.26	gold quality
lung	UBERON:0002048	45.08	gold quality
body of uterus	UBERON:0009853	44.96	gold quality
small intestine	UBERON:0002108	44.57	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	44.42	gold quality
gastrocnemius	UBERON:0001388	44.07	silver quality
left adrenal gland cortex	UBERON:0035825	43.77	silver quality
multicellular organism	UBERON:0000468	43.72	gold quality
thyroid gland	UBERON:0002046	43.11	silver quality
small intestine Peyer’s patch	UBERON:0003454	42.88	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	42.55	silver quality
heart left ventricle	UBERON:0002084	42.47	silver quality
body of pancreas	UBERON:0001150	42.21	silver quality
left ovary	UBERON:0002119	41.74	silver quality
left testis	UBERON:0004533	41.70	gold quality
left lobe of thyroid gland	UBERON:0001120	41.63	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.10

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.