LINC02526

Summary

LINC02526 (long intergenic non-protein coding RNA 2526, HGNC:53550) is a long non-coding RNA gene on chromosome 6q21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53550
Approved symbol	LINC02526
Name	long intergenic non-protein coding RNA 2526
Location	6q21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229654
Ensembl biotype	lncRNA
Entrez	105377926
RNAcentral	URS0000BC445F — lncRNA, 469 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000424162, ENST00000771592

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000424162 — 3 exons

Exon	Start	End
ENSE00001621351	106695535	106695674
ENSE00004134772	106696275	106696400
ENSE00004134774	106699842	106699997

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 79.61.

Top tissues by expression

120 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.61	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.02	gold quality
ganglionic eminence	UBERON:0004023	68.98	gold quality
cortical plate	UBERON:0005343	68.25	gold quality
right uterine tube	UBERON:0001302	66.42	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	65.02	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	64.39	gold quality
Ammon’s horn	UBERON:0001954	63.29	gold quality
skeletal muscle tissue	UBERON:0001134	63.02	gold quality
hypothalamus	UBERON:0001898	62.77	gold quality
amygdala	UBERON:0001876	62.40	gold quality
substantia nigra	UBERON:0002038	60.59	gold quality
primary visual cortex	UBERON:0002436	60.54	gold quality
cerebellar cortex	UBERON:0002129	60.03	gold quality
cerebellar hemisphere	UBERON:0002245	59.99	gold quality
cerebellum	UBERON:0002037	59.95	gold quality
caudate nucleus	UBERON:0001873	59.62	gold quality
nucleus accumbens	UBERON:0001882	59.36	gold quality
Brodmann (1909) area 9	UBERON:0013540	59.00	gold quality
cerebral cortex	UBERON:0000956	58.81	gold quality
brain	UBERON:0000955	58.70	gold quality
duodenum	UBERON:0002114	58.21	gold quality
putamen	UBERON:0001874	57.97	gold quality
lymph node	UBERON:0000029	57.92	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	57.92	gold quality
prefrontal cortex	UBERON:0000451	57.90	gold quality
anterior cingulate cortex	UBERON:0009835	57.70	gold quality
right hemisphere of cerebellum	UBERON:0014890	57.68	gold quality
superior frontal gyrus	UBERON:0002661	57.60	gold quality
frontal cortex	UBERON:0001870	57.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.