LINC02530

Summary

LINC02530 (long intergenic non-protein coding RNA 2530, HGNC:53556) is a long non-coding RNA gene on chromosome 6p24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53556
Approved symbol	LINC02530
Name	long intergenic non-protein coding RNA 2530
Location	6p24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000234015
Ensembl biotype	lncRNA
Entrez	101928309
RNAcentral	URS0000BC440A — lncRNA, 1053 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000457945

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457945 — 2 exons

Exon	Start	End
ENSE00001751260	12582915	12583507
ENSE00001803121	12585104	12585404

Expression profiles

Bgee: expression breadth broad, 41 present calls, max score 78.44.

Top tissues by expression

159 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.44	silver quality
ventricular zone	UBERON:0003053	63.21	gold quality
vermiform appendix	UBERON:0001154	48.88	gold quality
islet of Langerhans	UBERON:0000006	47.25	gold quality
muscle of leg	UBERON:0001383	46.81	silver quality
monocyte	CL:0000576	46.78	silver quality
buccal mucosa cell	CL:0002336	46.64	gold quality
gastrocnemius	UBERON:0001388	45.94	silver quality
right atrium auricular region	UBERON:0006631	44.62	silver quality
adult mammalian kidney	UBERON:0000082	44.47	gold quality
tibial artery	UBERON:0007610	43.44	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
pancreas	UBERON:0001264	43.13	silver quality
cardiac atrium	UBERON:0002081	43.09	silver quality
anterior cingulate cortex	UBERON:0009835	42.99	gold quality
aorta	UBERON:0000947	42.91	silver quality
caecum	UBERON:0001153	42.89	silver quality
skin of abdomen	UBERON:0001416	42.76	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	42.67	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
muscle tissue	UBERON:0002385	42.28	gold quality
heart	UBERON:0000948	42.12	silver quality
right frontal lobe	UBERON:0002810	41.88	silver quality
lymph node	UBERON:0000029	41.47	gold quality
body of pancreas	UBERON:0001150	41.46	silver quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
kidney	UBERON:0002113	41.27	silver quality
bone marrow	UBERON:0002371	41.14	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.