LINC02534

Summary

LINC02534 (long intergenic non-protein coding RNA 2534, HGNC:53567) is a long non-coding RNA gene on chromosome 6q22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53567
Approved symbol	LINC02534
Name	long intergenic non-protein coding RNA 2534
Location	6q22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228777
Ensembl biotype	lncRNA
Entrez	105377962
RNAcentral	URS0000A772D2 — lncRNA, 520 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000446525, ENST00000666770, ENST00000779568, ENST00000779569

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000446525 — 4 exons

Exon	Start	End
ENSE00001734753	115634140	115634347
ENSE00001772868	115633540	115633772
ENSE00003855626	115636222	115636264
ENSE00003882771	115643805	115643916

Expression profiles

Bgee: expression breadth broad, 59 present calls, max score 61.53.

Top tissues by expression

59 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
endometrium	UBERON:0001295	61.53	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	59.25	gold quality
right testis	UBERON:0004534	56.00	gold quality
liver	UBERON:0002107	55.96	gold quality
left testis	UBERON:0004533	54.91	gold quality
monocyte	CL:0000576	54.63	gold quality
testis	UBERON:0000473	54.59	gold quality
blood	UBERON:0000178	53.10	gold quality
sural nerve	UBERON:0015488	53.08	silver quality
tibial artery	UBERON:0007610	52.66	gold quality
hypothalamus	UBERON:0001898	51.46	gold quality
multicellular organism	UBERON:0000468	50.91	gold quality
adrenal tissue	UBERON:0018303	50.74	gold quality
gastrocnemius	UBERON:0001388	49.48	gold quality
corpus callosum	UBERON:0002336	49.16	silver quality
body of pancreas	UBERON:0001150	48.58	gold quality
omental fat pad	UBERON:0010414	48.22	gold quality
right lobe of thyroid gland	UBERON:0001119	47.94	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	47.21	gold quality
Ammon’s horn	UBERON:0001954	47.15	gold quality
prostate gland	UBERON:0002367	46.97	gold quality
thoracic aorta	UBERON:0001515	46.51	gold quality
ascending aorta	UBERON:0001496	46.19	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	46.10	gold quality
heart left ventricle	UBERON:0002084	46.08	gold quality
minor salivary gland	UBERON:0001830	45.64	gold quality
muscle layer of sigmoid colon	UBERON:0035805	45.49	gold quality
fundus of stomach	UBERON:0001160	44.85	gold quality
amygdala	UBERON:0001876	44.27	gold quality
nucleus accumbens	UBERON:0001882	43.68	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.15

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.