LINC02536

Summary

LINC02536 (long intergenic non-protein coding RNA 2536, HGNC:53570) is a long non-coding RNA gene on chromosome 6q22.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53570
Approved symbol	LINC02536
Name	long intergenic non-protein coding RNA 2536
Location	6q22.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000281248
Ensembl biotype	lncRNA
Entrez	105377997
RNAcentral	URS0000812051 — lncRNA, 625 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000625799

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000625799 — 4 exons

Exon	Start	End
ENSE00003760683	127665343	127665461
ENSE00003769995	127681331	127681555
ENSE00003771090	127664554	127664632
ENSE00003775201	127680352	127680553

Expression profiles

Bgee: expression breadth broad, 45 present calls, max score 55.14.

Top tissues by expression

45 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
monocyte	CL:0000576	55.14	silver quality
placenta	UBERON:0001987	54.54	gold quality
blood	UBERON:0000178	54.40	silver quality
prefrontal cortex	UBERON:0000451	53.80	gold quality
duodenum	UBERON:0002114	53.58	gold quality
calcaneal tendon	UBERON:0003701	51.61	silver quality
lymph node	UBERON:0000029	49.94	gold quality
cortex of kidney	UBERON:0001225	47.57	silver quality
primary visual cortex	UBERON:0002436	46.02	silver quality
esophagus	UBERON:0001043	45.31	silver quality
heart left ventricle	UBERON:0002084	44.89	silver quality
tonsil	UBERON:0002372	44.08	silver quality
caudate nucleus	UBERON:0001873	43.85	silver quality
lower esophagus muscularis layer	UBERON:0035833	43.55	gold quality
tibial nerve	UBERON:0001323	42.90	silver quality
right hemisphere of cerebellum	UBERON:0014890	42.80	silver quality
corpus callosum	UBERON:0002336	42.66	silver quality
spleen	UBERON:0002106	42.63	silver quality
right coronary artery	UBERON:0001625	41.42	silver quality
right atrium auricular region	UBERON:0006631	40.62	silver quality
small intestine Peyer’s patch	UBERON:0003454	40.36	silver quality
ascending aorta	UBERON:0001496	40.10	silver quality
minor salivary gland	UBERON:0001830	40.05	silver quality
body of uterus	UBERON:0009853	40.04	silver quality
body of stomach	UBERON:0001161	39.89	silver quality
Ammon’s horn	UBERON:0001954	39.55	silver quality
Brodmann (1909) area 9	UBERON:0013540	39.51	silver quality
tibial artery	UBERON:0007610	39.48	silver quality
esophagus mucosa	UBERON:0002469	39.28	silver quality
anterior cingulate cortex	UBERON:0009835	39.16	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.18

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.