LINC02543

Summary

LINC02543 (long intergenic non-protein coding RNA 2543, HGNC:53577) is a long non-coding RNA gene on chromosome 6p22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53577
Approved symbol	LINC02543
Name	long intergenic non-protein coding RNA 2543
Location	6p22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232947
Ensembl biotype	lncRNA
Entrez	101928406
RNAcentral	URS00008BDFEA — lncRNA, 1539 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000451285

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000451285 — 2 exons

Exon	Start	End
ENSE00001606508	15999161	15999797
ENSE00001660129	15994944	15995151

Expression profiles

Bgee: expression breadth broad, 13 present calls, max score 50.22.

Top tissues by expression

13 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
prefrontal cortex	UBERON:0000451	50.22	gold quality
monocyte	CL:0000576	48.50	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	45.91	silver quality
brain	UBERON:0000955	44.26	silver quality
caudate nucleus	UBERON:0001873	41.10	silver quality
islet of Langerhans	UBERON:0000006	40.38	silver quality
ascending aorta	UBERON:0001496	39.65	silver quality
omental fat pad	UBERON:0010414	39.21	silver quality
tibial artery	UBERON:0007610	38.70	silver quality
putamen	UBERON:0001874	38.00	silver quality
lower esophagus muscularis layer	UBERON:0035833	37.92	silver quality
left uterine tube	UBERON:0001303	35.26	silver quality
testis	UBERON:0000473	31.38	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.