LINC02545

Summary

LINC02545 (long intergenic non-protein coding RNA 2545, HGNC:53580) is a long non-coding RNA gene on chromosome 11p15.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53580
Approved symbol	LINC02545
Name	long intergenic non-protein coding RNA 2545
Location	11p15.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254930
Ensembl biotype	lncRNA
Entrez	105376561
RNAcentral	URS00003B2E19 — lncRNA, 306 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000525381, ENST00000530492, ENST00000733144, ENST00000733145, ENST00000733146, ENST00000733315, ENST00000733316

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000525381 — 4 exons

Exon	Start	End
ENSE00002164740	13844862	13845006
ENSE00002174956	13870548	13870616
ENSE00002188557	13869339	13869390
ENSE00002196407	13868637	13868676

Expression profiles

Bgee: expression breadth broad, 19 present calls, max score 66.64.

Top tissues by expression

19 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
prefrontal cortex	UBERON:0000451	66.64	gold quality
monocyte	CL:0000576	65.08	gold quality
left testis	UBERON:0004533	58.94	gold quality
testis	UBERON:0000473	58.62	gold quality
subcutaneous adipose tissue	UBERON:0002190	57.76	gold quality
tibial artery	UBERON:0007610	57.67	gold quality
blood	UBERON:0000178	57.12	gold quality
right testis	UBERON:0004534	56.37	gold quality
skin of abdomen	UBERON:0001416	53.23	gold quality
gastrocnemius	UBERON:0001388	49.92	gold quality
right atrium auricular region	UBERON:0006631	49.67	gold quality
corpus callosum	UBERON:0002336	49.58	silver quality
lower esophagus muscularis layer	UBERON:0035833	47.94	gold quality
Brodmann (1909) area 9	UBERON:0013540	46.98	gold quality
tibial nerve	UBERON:0001323	45.80	gold quality
adult mammalian kidney	UBERON:0000082	42.94	silver quality
skin of leg	UBERON:0001511	42.36	gold quality
right hemisphere of cerebellum	UBERON:0014890	39.66	silver quality
left lobe of thyroid gland	UBERON:0001120	39.52	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.