LINC02551

Summary

LINC02551 (long intergenic non-protein coding RNA 2551, HGNC:53586) is a long non-coding RNA gene on chromosome 11q24.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53586
Approved symbol	LINC02551
Name	long intergenic non-protein coding RNA 2551
Location	11q24.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	JunBP, RP11-890B15.2
Ensembl gene	ENSG00000254842
Ensembl biotype	lncRNA
Entrez	100507431
RNAcentral	URS00007E4D6D — lncRNA, 1468 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000533434, ENST00000533812, ENST00000741042, ENST00000741043, ENST00000741044, ENST00000741045, ENST00000741046, ENST00000741047, ENST00000741048, ENST00000741049

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000533434 — 4 exons

Exon	Start	End
ENSE00002154097	130847539	130847590
ENSE00002876959	130846127	130846191
ENSE00002937458	130846863	130847042
ENSE00004077805	130844642	130845036

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 79.52.

Top tissues by expression

224 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.52	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.82	gold quality
sural nerve	UBERON:0015488	69.79	gold quality
bone marrow cell	CL:0002092	63.64	silver quality
lower lobe of lung	UBERON:0008949	61.63	silver quality
hindlimb stylopod muscle	UBERON:0004252	60.69	gold quality
gastrocnemius	UBERON:0001388	58.79	gold quality
muscle of leg	UBERON:0001383	58.78	gold quality
gall bladder	UBERON:0002110	58.04	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.75	gold quality
right testis	UBERON:0004534	54.25	gold quality
islet of Langerhans	UBERON:0000006	53.43	gold quality
testis	UBERON:0000473	53.11	gold quality
left testis	UBERON:0004533	52.58	gold quality
tibial artery	UBERON:0007610	52.46	gold quality
popliteal artery	UBERON:0002250	52.38	gold quality
prefrontal cortex	UBERON:0000451	51.72	gold quality
monocyte	CL:0000576	51.48	silver quality
vermiform appendix	UBERON:0001154	51.47	gold quality
calcaneal tendon	UBERON:0003701	50.83	silver quality
descending thoracic aorta	UBERON:0002345	50.82	gold quality
aorta	UBERON:0000947	50.37	gold quality
right ovary	UBERON:0002118	49.91	gold quality
right coronary artery	UBERON:0001625	49.08	gold quality
granulocyte	CL:0000094	48.49	silver quality
upper lobe of lung	UBERON:0008948	48.09	gold quality
pancreas	UBERON:0001264	47.81	gold quality
thoracic aorta	UBERON:0001515	47.69	gold quality
ascending aorta	UBERON:0001496	47.62	gold quality
lymph node	UBERON:0000029	47.12	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.53

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.